RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 ANKRD35Q8N283 1001 aa21.53■■□□□ 1.04
CDHR4-201ENST00000343366 NECAB1Q8N987 351 aa21.53■■□□□ 1.04
CDHR4-201ENST00000343366 CCDC148Q8NFR7 591 aa21.53■■□□□ 1.04
CDHR4-201ENST00000343366 PHKBQ93100 1093 aa21.53■■□□□ 1.04
CDHR4-201ENST00000343366 MMP19Q99542 508 aa21.53■■□□□ 1.04
CDHR4-201ENST00000343366 BARHL2Q9NY43 387 aa21.53■■□□□ 1.04
CDHR4-201ENST00000343366 RIPK3Q9Y572 518 aa21.53■■□□□ 1.04
CDHR4-201ENST00000343366 CD2BP2O95400 341 aaKnown RBP21.52■■□□□ 1.04
CDHR4-201ENST00000343366 HOXC6P09630 235 aa21.52■■□□□ 1.04
CDHR4-201ENST00000343366 GRB14Q14449 540 aa21.52■■□□□ 1.04
CDHR4-201ENST00000343366 NSUN7Q8NE18 718 aaKnown RBP21.52■■□□□ 1.04
CDHR4-201ENST00000343366 DDX11Q96FC9 970 aa21.52■■□□□ 1.04
CDHR4-201ENST00000343366 HOMER2Q9NSB8 354 aa21.52■■□□□ 1.04
CDHR4-201ENST00000343366 DIS3Q9Y2L1 958 aaKnown RBP21.52■■□□□ 1.04
CDHR4-201ENST00000343366 ZNFX1Q9P2E3 1918 aaKnown RBP21.52■■□□□ 1.04
CDHR4-201ENST00000343366 LOC102724159A0A0B4J2E5 919 aa21.51■■□□□ 1.03
CDHR4-201ENST00000343366 GHRHRQ02643 423 aa21.51■■□□□ 1.03
CDHR4-201ENST00000343366 PWP2Q15269 919 aaKnown RBP21.51■■□□□ 1.03
CDHR4-201ENST00000343366 MCTP2Q6DN12 878 aa21.51■■□□□ 1.03
CDHR4-201ENST00000343366 HEATR3Q7Z4Q2 680 aa21.51■■□□□ 1.03
CDHR4-201ENST00000343366 PIBF1Q8WXW3 757 aa21.51■■□□□ 1.03
CDHR4-201ENST00000343366 CUL5Q93034 780 aa21.51■■□□□ 1.03
CDHR4-201ENST00000343366 FAM161BQ96MY7 647 aa21.51■■□□□ 1.03
CDHR4-201ENST00000343366 CDX2Q99626 313 aaPredicted RBP21.51■■□□□ 1.03
CDHR4-201ENST00000343366 ORC3Q9UBD5 711 aaPredicted RBP21.51■■□□□ 1.03
CDHR4-201ENST00000343366 DDX20Q9UHI6 824 aaKnown RBP21.51■■□□□ 1.03
CDHR4-201ENST00000343366 ESYT2A0FGR8 921 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 PPP1R11O60927 126 aaPredicted RBP21.5■■□□□ 1.03
CDHR4-201ENST00000343366 GNA11P29992 359 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 NAPAP54920 295 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 CUL4AQ13619 759 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 PKN1Q16512 942 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 GALNT17Q6IS24 598 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 SMARCC2Q8TAQ2 1214 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 BICD2Q8TD16 824 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 CLEC4DQ8WXI8 215 aa21.5■■□□□ 1.03
CDHR4-201ENST00000343366 INTS4Q96HW7 963 aaKnown RBP21.5■■□□□ 1.03
CDHR4-201ENST00000343366 SENP6Q9GZR1 1112 aaPredicted RBP21.5■■□□□ 1.03
CDHR4-201ENST00000343366 PTPDC1A2A3K4 754 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 B4DLN1 442 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 DNM1LO00429 736 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 CTDNEP1O95476 244 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 MRPL12P52815 198 aaKnown RBP21.49■■□□□ 1.03
CDHR4-201ENST00000343366 BECN1Q14457 450 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 ZNF697Q5TEC3 545 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 WWC2Q6AWC2 1192 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 RNF207Q6ZRF8 634 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 DPP9Q86TI2 863 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 TRPV1Q8NER1 839 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 MPHOSPH6Q99547 160 aaKnown RBP21.49■■□□□ 1.03
CDHR4-201ENST00000343366 SMCHD1A6NHR9 2005 aa21.49■■□□□ 1.03
CDHR4-201ENST00000343366 GCOM1H8Y6P7 765 aaPredicted RBP21.48■■□□□ 1.03
CDHR4-201ENST00000343366 PIK3CDO00329 1044 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 MSCO60682 206 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 POLR2MP0CAP2 368 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 CALML3P27482 149 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 ADORA2AP29274 412 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 SNX17Q15036 470 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 MUM1L1Q5H9M0 696 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 NSMFQ6X4W1 530 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 MSL3Q8N5Y2 521 aaKnown RBP21.48■■□□□ 1.03
CDHR4-201ENST00000343366 FAM184AQ8NB25 1140 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 LBHD1Q9BQE6 289 aaPredicted RBP21.48■■□□□ 1.03
CDHR4-201ENST00000343366 TTYH1Q9H313 450 aaPredicted RBP21.48■■□□□ 1.03
CDHR4-201ENST00000343366 SEMA6BQ9H3T3 888 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 PSTPIP2Q9H939 334 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 C6orf50Q9HD87 102 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 A1CFQ9NQ94 594 aaKnown RBP21.48■■□□□ 1.03
CDHR4-201ENST00000343366 CYP39A1Q9NYL5 469 aa21.48■■□□□ 1.03
CDHR4-201ENST00000343366 ADD3Q9UEY8 706 aaKnown RBP21.48■■□□□ 1.03
CDHR4-201ENST00000343366 hCG_1642624A0A1W2PR95 340 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 STXBP3O00186 592 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 NFIBO00712 420 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 CYBAP13498 195 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 HSD17B4P51659 736 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 RTP1P59025 263 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 TRIM29Q14134 588 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 SHHQ15465 462 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 C9orf50Q5SZB4 431 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 ZNF467Q7Z7K2 595 aaPredicted RBP21.47■■□□□ 1.03
CDHR4-201ENST00000343366 DNERQ8NFT8 737 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 NPLOC4Q8TAT6 608 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 ZMYND12Q9H0C1 365 aa21.47■■□□□ 1.03
CDHR4-201ENST00000343366 PLXNA1Q9UIW2 1896 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 DNAJC25-GNG10A0A024R161 153 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 CFBP00751 764 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 ST3GAL1Q11201 340 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 MFSD14CQ5VZR4 134 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 MAFAQ8NHW3 353 aaPredicted RBP21.46■■□□□ 1.03
CDHR4-201ENST00000343366 GPKOWQ92917 476 aaPredicted RBP eCLIP21.46■■□□□ 1.03
CDHR4-201ENST00000343366 RIC8AQ9NPQ8 531 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 PRDM6Q9NQX0 595 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 SMC3Q9UQE7 1217 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 CHD9Q3L8U1 2897 aa21.46■■□□□ 1.03
CDHR4-201ENST00000343366 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
CDHR4-201ENST00000343366 FOSP01100 380 aaPredicted RBP21.45■■□□□ 1.02
CDHR4-201ENST00000343366 PDIA4P13667 645 aaKnown RBP21.45■■□□□ 1.02
CDHR4-201ENST00000343366 ADCY7P51828 1080 aa21.45■■□□□ 1.02
CDHR4-201ENST00000343366 ATN1P54259 1190 aaPredicted RBP21.45■■□□□ 1.02
CDHR4-201ENST00000343366 RPS6P62753 249 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms