RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 AS3MTQ9HBK9 375 aa21.23■□□□□ 0.99
CDK13-202ENST00000340829 DCP1AQ9NPI6 582 aaPredicted RBP21.23■□□□□ 0.99
CDK13-202ENST00000340829 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
CDK13-202ENST00000340829 BMP3P12645 472 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 CUL4BQ13620 913 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 RAB17Q9H0T7 212 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 NARFQ9UHQ1 456 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 RIPOR2Q9Y4F9 1068 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 FAM169AQ9Y6X4 670 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 TRIM28Q13263 835 aaKnown RBP21.22■□□□□ 0.99
CDK13-202ENST00000340829 MTMR3Q13615 1198 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 CC2D2BQ6DHV5 1058 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 FAM204AQ9H8W3 233 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.22■□□□□ 0.99
CDK13-202ENST00000340829 KIF28PB7ZC32 967 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 KRT31Q15323 416 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 TBC1D10BQ4KMP7 808 aaPredicted RBP21.22■□□□□ 0.99
CDK13-202ENST00000340829 RIC8AQ9NPQ8 531 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 IQGAP1P46940 1657 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 ZC3H13Q5T200 1668 aaKnown RBP21.22■□□□□ 0.99
CDK13-202ENST00000340829 FERP16591 822 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 ZNF577Q9BSK1 485 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 DPH5Q9H2P9 285 aa21.22■□□□□ 0.99
CDK13-202ENST00000340829 CTNNA1P35221 906 aaKnown RBP21.21■□□□□ 0.99
CDK13-202ENST00000340829 HGSO14964 777 aaPredicted RBP21.21■□□□□ 0.99
CDK13-202ENST00000340829 BAG6P46379 1132 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 ALX1Q15699 326 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 RETREG2Q8NC44 543 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 SPTLC3Q9NUV7 552 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 CLIC2O15247 247 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 CLUL1Q15846 466 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 TMEM47Q9BQJ4 181 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 TRIM6Q9C030 488 aaPredicted RBP21.21■□□□□ 0.99
CDK13-202ENST00000340829 E7EVH7 732 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 EXOSC10Q01780 885 aaKnown RBP21.21■□□□□ 0.99
CDK13-202ENST00000340829 PPP1R21Q6ZMI0 780 aa21.21■□□□□ 0.99
CDK13-202ENST00000340829 PFKFB3Q16875 520 aaPredicted RBP21.2■□□□□ 0.98
CDK13-202ENST00000340829 CEP85LQ5SZL2 805 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 IRX5P78411 483 aaPredicted RBP21.2■□□□□ 0.98
CDK13-202ENST00000340829 NAA35Q5VZE5 725 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 PDLIM2Q96JY6 352 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 MLXIPQ9HAP2 919 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 PDE11AQ9HCR9 933 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 N4BP1O75113 896 aaKnown RBP21.2■□□□□ 0.98
CDK13-202ENST00000340829 TCP11X2Q5H9J9 407 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 SMC6Q96SB8 1091 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 PI4KBQ9UBF8 816 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 A6NNZ2 444 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 KCNQ2O43526 872 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 CACNB3P54284 484 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 SNAP25P60880 206 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 TUBB8Q3ZCM7 444 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 DHX36Q9H2U1 1008 aaKnown RBP21.2■□□□□ 0.98
CDK13-202ENST00000340829 C1orf167Q5SNV9 1468 aa21.2■□□□□ 0.98
CDK13-202ENST00000340829 ZMYND10O75800 440 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 SLC8A3P57103 927 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 CDC37Q16543 378 aaPredicted RBP21.19■□□□□ 0.98
CDK13-202ENST00000340829 CCDC144BQ3MJ40 725 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 DCAF15Q66K64 600 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 DENND2CQ68D51 928 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 INTS8Q75QN2 995 aaKnown RBP21.19■□□□□ 0.98
CDK13-202ENST00000340829 SEPT12Q8IYM1 358 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 THAP9Q9H5L6 903 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 C1orf112Q9NSG2 853 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 RAD17O75943 681 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 CYP27A1Q02318 531 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 CEP128Q6ZU80 1094 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 ANKRD35Q8N283 1001 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 KCNG1Q9UIX4 513 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 PNMA6FA0A0J9YX94 578 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 USP17L5A8MUK1 530 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 GAS8O95995 478 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 DMP1Q13316 513 aaPredicted RBP21.19■□□□□ 0.98
CDK13-202ENST00000340829 KRT27Q7Z3Y8 459 aa21.19■□□□□ 0.98
CDK13-202ENST00000340829 INPP5BP32019 993 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 GUCY2DQ02846 1103 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 TAF6LQ9Y6J9 622 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 ADAMTS13Q76LX8 1427 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 PRR29P0C7W0 189 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 CA8P35219 290 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 ARL1P40616 181 aaPredicted RBP21.18■□□□□ 0.98
CDK13-202ENST00000340829 SYDE2Q5VT97 1194 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 FAM186BQ8IYM0 893 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 METTL13Q8N6R0 699 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 ZNF579Q8NAF0 562 aaKnown RBP21.18■□□□□ 0.98
CDK13-202ENST00000340829 PANX2Q96RD6 677 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 EMILIN3Q9NT22 766 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 CSADQ9Y600 493 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 PRPF6O94906 941 aaKnown RBP21.18■□□□□ 0.98
CDK13-202ENST00000340829 AFPP02771 609 aaKnown RBP21.18■□□□□ 0.98
CDK13-202ENST00000340829 PLA2G4BP0C869 781 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 VPS41P49754 854 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 PDE6CP51160 858 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 GTF2A1P52655 376 aaPredicted RBP21.18■□□□□ 0.98
CDK13-202ENST00000340829 ZBED6P86452 979 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 MYL7Q01449 175 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 COA1Q9GZY4 146 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 SUGCTQ9HAC7 445 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 SH3GLB2Q9NR46 395 aa21.18■□□□□ 0.98
CDK13-202ENST00000340829 NDUFA10O95299 355 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms