RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 FOXR1Q6PIV2 292 aa18.34■□□□□ 0.53
TRIM9-202ENST00000338969 KRT25Q7Z3Z0 450 aa18.34■□□□□ 0.53
TRIM9-202ENST00000338969 SEMA6BQ9H3T3 888 aa18.34■□□□□ 0.53
TRIM9-202ENST00000338969 PDS5AQ29RF7 1337 aaKnown RBP18.34■□□□□ 0.53
TRIM9-202ENST00000338969 KRT83P78385 493 aa18.33■□□□□ 0.53
TRIM9-202ENST00000338969 TXLNBQ8N3L3 684 aa18.33■□□□□ 0.53
TRIM9-202ENST00000338969 ZNF507Q8TCN5 953 aa18.33■□□□□ 0.53
TRIM9-202ENST00000338969 THAP9Q9H5L6 903 aa18.33■□□□□ 0.53
TRIM9-202ENST00000338969 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 GNA11P29992 359 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 EIF4A3P38919 411 aaKnown RBP18.33■□□□□ 0.52
TRIM9-202ENST00000338969 SNAP25P60880 206 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 KCNK18Q7Z418 384 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 C10orf67Q8IYJ2 551 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 CCSER1Q9C0I3 900 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 DOCK2Q92608 1830 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 RASSF10A6NK89 507 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 SRGNP10124 158 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 GSTO1P78417 241 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 KCTD1Q719H9 257 aa18.33■□□□□ 0.52
TRIM9-202ENST00000338969 IFIH1Q9BYX4 1025 aaKnown RBP18.33■□□□□ 0.52
TRIM9-202ENST00000338969 COL16A1Q07092 1604 aaPredicted RBP18.32■□□□□ 0.52
TRIM9-202ENST00000338969 ATP8B1O43520 1251 aa18.32■□□□□ 0.52
TRIM9-202ENST00000338969 MYBL2P10244 700 aa18.32■□□□□ 0.52
TRIM9-202ENST00000338969 AMPD2Q01433 879 aa18.32■□□□□ 0.52
TRIM9-202ENST00000338969 LEKR1Q6ZMV7 388 aa18.32■□□□□ 0.52
TRIM9-202ENST00000338969 DNAAF5Q86Y56 855 aa18.32■□□□□ 0.52
TRIM9-202ENST00000338969 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
TRIM9-202ENST00000338969 CAPN6Q9Y6Q1 641 aa18.32■□□□□ 0.52
TRIM9-202ENST00000338969 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
TRIM9-202ENST00000338969 SECISBP2LQ93073 1101 aaKnown RBP18.32■□□□□ 0.52
TRIM9-202ENST00000338969 MMTAG2Q9BU76 263 aaKnown RBP18.32■□□□□ 0.52
TRIM9-202ENST00000338969 BICDL2A1A5D9 508 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 VGLL3A8MV65 326 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 NFRKBQ6P4R8 1299 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 GOLGA6L1Q8N7Z2 621 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 MSANTD4Q8NCY6 345 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 DHTKD1Q96HY7 919 aaPredicted RBP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 FAM204AQ9H8W3 233 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 SH3GLB2Q9NR46 395 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 POLLQ9UGP5 575 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 MKRN1Q9UHC7 482 aaKnown RBP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 FLT1P17948 1338 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 BCORQ6W2J9 1755 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 TRAF5O00463 557 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 MAP2K7O14733 419 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 AKR1B1P15121 316 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 TTC19Q6DKK2 380 aaPredicted RBP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 DNAJC7Q99615 494 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 NPHP3-ACAD11A0A0J9YXS1 232 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 ZNF263O14978 683 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 ZBED6P86452 979 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 AMPD3Q01432 767 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 KCNB1Q14721 858 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 CCDC181Q5TID7 509 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 TRAPPC11Q7Z392 1133 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 HDAC7Q8WUI4 952 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 RTFDC1Q9BY42 306 aaPredicted RBP18.31■□□□□ 0.52
TRIM9-202ENST00000338969 RSPH14Q9UHP6 348 aa18.31■□□□□ 0.52
TRIM9-202ENST00000338969 M0R2N6 131 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 TRIM66O15016 1216 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 RASSF7Q02833 373 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 GRB10Q13322 594 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
TRIM9-202ENST00000338969 GBP3Q9H0R5 595 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 LCMT1Q9UIC8 334 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 LRRC53A6NM62 1247 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 KRT18P05783 430 aaKnown RBP18.3■□□□□ 0.52
TRIM9-202ENST00000338969 IRX5P78411 483 aaPredicted RBP18.3■□□□□ 0.52
TRIM9-202ENST00000338969 TMEM266Q2M3C6 531 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 CNNM4Q6P4Q7 775 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 LARP4BQ92615 738 aaKnown RBP18.3■□□□□ 0.52
TRIM9-202ENST00000338969 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
TRIM9-202ENST00000338969 ZMYND12Q9H0C1 365 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 LEMD3Q9Y2U8 911 aa18.3■□□□□ 0.52
TRIM9-202ENST00000338969 GFPT1Q06210 699 aaPredicted RBP18.29■□□□□ 0.52
TRIM9-202ENST00000338969 FAM114A1Q8IWE2 563 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 NDST4Q9H3R1 872 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 ADCY7P51828 1080 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 USP14P54578 494 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 MIIPQ5JXC2 388 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
TRIM9-202ENST00000338969 TAF3Q5VWG9 929 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 KRT79Q5XKE5 535 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 SND1Q7KZF4 910 aaKnown RBP eCLIP18.29■□□□□ 0.52
TRIM9-202ENST00000338969 DDX12PQ92771 950 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 RAB21Q9UL25 225 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 RNF40O75150 1001 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 MAGEA1P43355 309 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 ZNF287Q9HBT7 754 aa18.29■□□□□ 0.52
TRIM9-202ENST00000338969 KIF11P52732 1056 aa18.28■□□□□ 0.52
TRIM9-202ENST00000338969 IKQ13123 557 aaPredicted RBP18.28■□□□□ 0.52
TRIM9-202ENST00000338969 SHROOM1Q2M3G4 852 aaPredicted RBP18.28■□□□□ 0.52
TRIM9-202ENST00000338969 UBXN6Q9BZV1 441 aa18.28■□□□□ 0.52
TRIM9-202ENST00000338969 ZC3H12CQ9C0D7 883 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms