RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 OR6J1Q8NGC5 347 aa12.46□□□□□ -0.41
CAPN3-202ENST00000337571 SCFD2Q8WU76 684 aa12.46□□□□□ -0.41
CAPN3-202ENST00000337571 MAF1Q9H063 256 aa12.46□□□□□ -0.41
CAPN3-202ENST00000337571 VAT1LQ9HCJ6 419 aa12.46□□□□□ -0.41
CAPN3-202ENST00000337571 ABCB11O95342 1321 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
CAPN3-202ENST00000337571 NKRFO15226 690 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPN3-202ENST00000337571 FGBP02675 491 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 ACRP10323 421 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 FOSL2P15408 326 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 PSMC6P62333 389 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 TRDNQ13061 729 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 TMEM240Q5SV17 173 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 TMEM63BQ5T3F8 832 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 IFIT1BQ5T764 474 aaKnown RBP12.45□□□□□ -0.42
CAPN3-202ENST00000337571 ZNF365Q70YC5 407 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPN3-202ENST00000337571 ADGRF4Q8IZF3 695 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 MYLIPQ8WY64 445 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 MTG1Q9BT17 334 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-202ENST00000337571 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-202ENST00000337571 IL23AQ9NPF7 189 aa12.45□□□□□ -0.42
CAPN3-202ENST00000337571 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
CAPN3-202ENST00000337571 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 TNKSO95271 1327 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 B4GALT4O60513 344 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 TXNP10599 105 aaKnown RBP12.44□□□□□ -0.42
CAPN3-202ENST00000337571 PTGS1P23219 599 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 DNAJB2P25686 324 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 CCL23P55773 120 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 TTLL4Q14679 1199 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-202ENST00000337571 FAM47CQ5HY64 1035 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 C16orf59Q7L2K0 433 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 FBXO11Q86XK2 927 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 ENAHQ8N8S7 591 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-202ENST00000337571 MAFAQ8NHW3 353 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-202ENST00000337571 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
CAPN3-202ENST00000337571 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 CPVLQ9H3G5 476 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
CAPN3-202ENST00000337571 LRRC37A2A6NM11 1700 aa12.44□□□□□ -0.42
CAPN3-202ENST00000337571 GRIN2DO15399 1336 aa12.43□□□□□ -0.42
CAPN3-202ENST00000337571 LCTP09848 1927 aa12.43□□□□□ -0.42
CAPN3-202ENST00000337571 MYH6P13533 1939 aa12.43□□□□□ -0.42
CAPN3-202ENST00000337571 ERICH2A1L162 156 aa12.43□□□□□ -0.42
CAPN3-202ENST00000337571 IWS1Q96ST2 819 aa12.43□□□□□ -0.42
CAPN3-202ENST00000337571 ALDH8A1Q9H2A2 487 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-202ENST00000337571 ZNF576Q9H609 170 aa12.43□□□□□ -0.42
CAPN3-202ENST00000337571 MSRAQ9UJ68 235 aa12.43□□□□□ -0.42
CAPN3-202ENST00000337571 A6NJR5 290 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 EDNRBP24530 442 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 CHMP4BP1P59074 171 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
CAPN3-202ENST00000337571 TRAF1Q13077 416 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 RAB30Q15771 203 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 STXBP2Q15833 593 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 ARHGEF16Q5VV41 709 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 SEPT14Q6ZU15 432 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 OTOP2Q7RTS6 562 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 RETREG2Q8NC44 543 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 HERVK_113Q902F9 699 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 RMDN3Q96TC7 470 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 NOC4LQ9BVI4 516 aaKnown RBP12.42□□□□□ -0.42
CAPN3-202ENST00000337571 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 NOD1Q9Y239 953 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
CAPN3-202ENST00000337571 PRUNE2Q8WUY3 3088 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 GRXCR1A8MXD5 290 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 GRIN2CQ14957 1233 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 QRICH1Q2TAL8 776 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 NBPF20Q3BBV1 942 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 SYTL5Q8TDW5 730 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-202ENST00000337571 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 TAAR1Q96RJ0 339 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 TRMT13Q9NUP7 481 aaKnown RBP12.41□□□□□ -0.42
CAPN3-202ENST00000337571 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
CAPN3-202ENST00000337571 ZBBXA8MT70 800 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 EIF3JO75822 258 aaKnown RBP12.4□□□□□ -0.42
CAPN3-202ENST00000337571 CFBP00751 764 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 GH1P01241 217 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 PFKMP08237 780 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 CYP2C9P11712 490 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
CAPN3-202ENST00000337571 PTPN11Q06124 597 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-202ENST00000337571 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.42
CAPN3-202ENST00000337571 RASIP1Q5U651 963 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 NFRKBQ6P4R8 1299 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 RALYLQ86SE5 291 aaKnown RBP12.4□□□□□ -0.42
CAPN3-202ENST00000337571 COPS5Q92905 334 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms