RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CFBP00751 764 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 NR5A1Q13285 461 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 ARMC3Q5W041 872 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 MYCT1Q8N699 235 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 CCHCR1Q8TD31 782 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 PARD3BQ8TEW8 1205 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 DDX27Q96GQ7 796 aaKnown RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 OSBPL1AQ9BXW6 950 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 PUS7LQ9H0K6 701 aaKnown RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 NOD2Q9HC29 1040 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 MFSD14BQ5SR56 506 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 ABTB1Q969K4 478 aaPredicted RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 VCPKMTQ9H867 229 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 NKIRAS1Q9NYS0 192 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 PPP6R2O75170 966 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 SLC8A3P57103 927 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 TRIM10Q9UDY6 481 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 CDC25AP30304 524 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 FAM98CQ17RN3 349 aaKnown RBP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 RDH13Q8NBN7 331 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 ENGASEQ8NFI3 743 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 ELAC2Q9BQ52 826 aaKnown RBP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 hCG_2014768A0A024R1R8 64 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 HMGB1P1B2RPK0 211 aaPredicted RBP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 GSDMAQ96QA5 445 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 DDX39AO00148 427 aaKnown RBP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 RPN1P04843 607 aaKnown RBP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 MDH1P40925 334 aaKnown RBP17.56■□□□□ 0.4
NPHP3-201ENST00000337331 LAMB3Q13751 1172 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 MYOCDQ8IZQ8 938 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 CPXCR1Q8N123 301 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 HOOK2Q96ED9 719 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 LRRC1Q9BTT6 524 aa17.56■□□□□ 0.4
NPHP3-201ENST00000337331 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 TSNARE1Q96NA8 513 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 SLC39A2Q9NP94 309 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
NPHP3-201ENST00000337331 NT5C3AQ9H0P0 336 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 PCDHA12Q9UN75 941 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 PLAAQ9Y263 795 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 GTF2IP78347 998 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 WDR44Q5JSH3 913 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 THEMIS2Q5TEJ8 643 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 STMN2Q93045 179 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 FOXP1Q9H334 677 aaPredicted RBP17.55■□□□□ 0.4
NPHP3-201ENST00000337331 TSKSQ9UJT2 592 aa17.55■□□□□ 0.4
NPHP3-201ENST00000337331 ERCC5P28715 1186 aaPredicted RBP17.54■□□□□ 0.4
NPHP3-201ENST00000337331 COPB1P53618 953 aaKnown RBP17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ARHGAP44Q17R89 818 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 NEK8Q86SG6 692 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 KSR1Q8IVT5 923 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 KIFAP3Q92845 792 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 RNF26Q9BY78 433 aaPredicted RBP17.54■□□□□ 0.4
NPHP3-201ENST00000337331 SH2D4AQ9H788 454 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 KCND1Q9NSA2 647 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 COMMD10Q9Y6G5 202 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 RASSF10A6NK89 507 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 H0Y3Z8 333 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 FOXN1O15353 648 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ANP32DO95626 131 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 DRP2Q13474 957 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 UBL4BQ8N7F7 174 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 JDP2Q8WYK2 163 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ASIC3Q9UHC3 531 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ADD2P35612 726 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ANKRD42Q8N9B4 389 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ERBB3P21860 1342 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 PRKAB2O43741 272 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 ARMC9Q7Z3E5 817 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 MRRFQ96E11 262 aaKnown RBP17.54■□□□□ 0.4
NPHP3-201ENST00000337331 CYFIP2Q96F07 1278 aa17.54■□□□□ 0.4
NPHP3-201ENST00000337331 INTS9Q9NV88 658 aaKnown RBP17.54■□□□□ 0.4
NPHP3-201ENST00000337331 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
NPHP3-201ENST00000337331 SYF2O95926 243 aaKnown RBP17.53■□□□□ 0.4
NPHP3-201ENST00000337331 CUL3Q13618 768 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 WDR93Q6P2C0 686 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 STAMBPL1Q96FJ0 436 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 ZSWIM5Q9P217 1185 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 SCOCQ9UIL1 159 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 GGT7Q9UJ14 662 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 MCM8Q9UJA3 840 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 RGS16O15492 202 aaPredicted RBP17.53■□□□□ 0.4
NPHP3-201ENST00000337331 SNX1Q13596 522 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 SMC6Q96SB8 1091 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 LSM14BQ9BX40 385 aaKnown RBP17.53■□□□□ 0.4
NPHP3-201ENST00000337331 DPH5Q9H2P9 285 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 CHCHD3Q9NX63 227 aaKnown RBP17.53■□□□□ 0.4
NPHP3-201ENST00000337331 IFNAR1P17181 557 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 GPBP1Q86WP2 473 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 MYCBPAPQ8TBZ2 947 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 RASGRP4Q8TDF6 673 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.53■□□□□ 0.4
NPHP3-201ENST00000337331 KIFC2Q96AC6 838 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms