RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RIC8AQ9NPQ8 531 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 TBC1D8O95759 1140 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 HLA-DOAP06340 250 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 FKBP15Q5T1M5 1219 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 UNC13DQ70J99 1090 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 KCTD1Q719H9 257 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 KIAA1328Q86T90 577 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 CUL5Q93034 780 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 TTYH3Q9C0H2 523 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 MARCH6O60337 910 aa19.75■□□□□ 0.75
LRCH3-201ENST00000334859 IPO7O95373 1038 aaKnown RBP19.75■□□□□ 0.75
LRCH3-201ENST00000334859 HERVK_113P62684 666 aa19.75■□□□□ 0.75
LRCH3-201ENST00000334859 MIIPQ5JXC2 388 aa19.75■□□□□ 0.75
LRCH3-201ENST00000334859 CDC42EP5Q6NZY7 148 aa19.75■□□□□ 0.75
LRCH3-201ENST00000334859 RETREG2Q8NC44 543 aa19.75■□□□□ 0.75
LRCH3-201ENST00000334859 TFR2Q9UP52 801 aa19.75■□□□□ 0.75
LRCH3-201ENST00000334859 QSER1Q2KHR3 1735 aa19.75■□□□□ 0.75
LRCH3-201ENST00000334859 ANKRD31Q8N7Z5 1873 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 EDIL3O43854 480 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 SASH3O75995 380 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 MEA1Q16626 185 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 WHAMMP3Q1A5X7 153 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 CCDC122Q5T0U0 273 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 RAD54LQ92698 747 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 TEKT1Q969V4 418 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 HAUS4Q9H6D7 363 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 DDX25Q9UHL0 483 aaKnown RBP19.74■□□□□ 0.75
LRCH3-201ENST00000334859 CTAGE15A4D2H0 777 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 USP17L10C9JJH3 530 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 NKRFO15226 690 aaKnown RBP eCLIP19.74■□□□□ 0.75
LRCH3-201ENST00000334859 CTAGE8P0CG41 777 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 KRT83P78385 493 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 ZBED6P86452 979 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 COBLL1Q53SF7 1204 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 GPATCH4Q5T3I0 446 aaKnown RBP19.74■□□□□ 0.75
LRCH3-201ENST00000334859 CTAGE6Q86UF2 777 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 CTAGE4Q8IX94 777 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 NUDT12Q9BQG2 462 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 MYO3BQ8WXR4 1341 aa19.74■□□□□ 0.75
LRCH3-201ENST00000334859 CCDC151A5D8V7 595 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 ATP8B1O43520 1251 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 SLURP2P0DP57 97 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 CYLC1P35663 651 aaPredicted RBP19.73■□□□□ 0.75
LRCH3-201ENST00000334859 NFIAQ12857 509 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 PDIA5Q14554 519 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 CENPPQ6IPU0 288 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 ANKZF1Q9H8Y5 726 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 MYO6Q9UM54 1294 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 MYH4Q9Y623 1939 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 PVALEFA0A1B0GWK0 134 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 RASSF10A6NK89 507 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 ZBTB5O15062 677 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 MRPL12P52815 198 aaKnown RBP19.73■□□□□ 0.75
LRCH3-201ENST00000334859 KCNK18Q7Z418 384 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 ZSCAN29Q8IWY8 852 aaPredicted RBP19.73■□□□□ 0.75
LRCH3-201ENST00000334859 GJA10Q969M2 543 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 PKNOX2Q96KN3 472 aa19.73■□□□□ 0.75
LRCH3-201ENST00000334859 NHEJ1Q9H9Q4 299 aaPredicted RBP19.73■□□□□ 0.75
LRCH3-201ENST00000334859 POTEB2H3BUK9 544 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 BRD3Q15059 726 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 NCAPH2Q6IBW4 605 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 PPP4R3AQ6IN85 833 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 DDX12PQ92771 950 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 JAKMIP2Q96AA8 810 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 ERGIC2Q96RQ1 377 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 PSTPIP2Q9H939 334 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 ENC1O14682 589 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 KIF20AO95235 890 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 RHOXF2BP0C7M4 288 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 AMPD2Q01433 879 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 LONRF2Q1L5Z9 754 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 RHOXF2Q9BQY4 288 aa19.72■□□□□ 0.75
LRCH3-201ENST00000334859 TMX4Q9H1E5 349 aaPredicted RBP19.72■□□□□ 0.75
LRCH3-201ENST00000334859 KRT86O43790 486 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 NPR1P16066 1061 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 TMEM119Q4V9L6 283 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 APOBEC3HQ6NTF7 200 aaKnown RBP19.71■□□□□ 0.75
LRCH3-201ENST00000334859 GUF1Q8N442 669 aaKnown RBP19.71■□□□□ 0.75
LRCH3-201ENST00000334859 UIMC1Q96RL1 719 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 PNKPQ96T60 521 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 MYH7BA7E2Y1 1941 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 C10orf71Q711Q0 1435 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 FAM196BA6NMK8 535 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 PSMD14O00487 310 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 SSBP05455 408 aaKnown RBP eCLIP19.71■□□□□ 0.75
LRCH3-201ENST00000334859 ERCC3P19447 782 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 CLK2P49760 499 aaKnown RBP19.71■□□□□ 0.75
LRCH3-201ENST00000334859 CACNB3P54284 484 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 VWA3BQ502W6 1294 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 HHIPL2Q6UWX4 724 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 EHBP1Q8NDI1 1231 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 LRRC27Q9C0I9 530 aa19.71■□□□□ 0.75
LRCH3-201ENST00000334859 FAM207AQ9NSI2 230 aaPredicted RBP19.71■□□□□ 0.75
LRCH3-201ENST00000334859 POLR3GO15318 223 aaPredicted RBP19.7■□□□□ 0.74
LRCH3-201ENST00000334859 TCP10Q12799 353 aa19.7■□□□□ 0.74
LRCH3-201ENST00000334859 LRRC41Q15345 812 aa19.7■□□□□ 0.74
LRCH3-201ENST00000334859 ZFPM1Q8IX07 1006 aa19.7■□□□□ 0.74
LRCH3-201ENST00000334859 CCDC170Q8IYT3 715 aa19.7■□□□□ 0.74
LRCH3-201ENST00000334859 HAS1Q92839 578 aa19.7■□□□□ 0.74
LRCH3-201ENST00000334859 NDST4Q9H3R1 872 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms