RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 SNX12Q9UMY4 172 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 DUSP10Q9Y6W6 482 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 AGPSO00116 658 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 MNAT1P51948 309 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 RASSF7Q02833 373 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 STK4Q13043 487 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 PAK2Q13177 524 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 RNF187Q5TA31 235 aaPredicted RBP9.66□□□□□ -0.86
LIMK2-201ENST00000331728 NFRKBQ6P4R8 1299 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 MICALCLQ6ZW33 695 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 TSKSQ9UJT2 592 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 PCDHA6Q9UN73 950 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 PCDHA8Q9Y5H6 950 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 EIF3HO15372 352 aaKnown RBP eCLIP9.66□□□□□ -0.86
LIMK2-201ENST00000331728 CAMTA2O94983 1202 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 GRM4Q14833 912 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 VWA3BQ502W6 1294 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 ODF2Q5BJF6 829 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 ZNF662Q6ZS27 426 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 GPATCH11Q8N954 259 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 CPVLQ9H3G5 476 aa9.66□□□□□ -0.86
LIMK2-201ENST00000331728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
LIMK2-201ENST00000331728 ATP1A2P50993 1020 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 IRF2BP1Q8IU81 584 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 AENQ8WTP8 325 aaKnown RBP9.65□□□□□ -0.86
LIMK2-201ENST00000331728 CELF1Q92879 486 aaKnown RBP9.65□□□□□ -0.86
LIMK2-201ENST00000331728 HPS3Q969F9 1004 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 OSBPL9Q96SU4 736 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 STIM2Q9P246 746 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 A6NNZ2 444 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 TMCO5BA8MYB1 307 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 PDE2AO00408 941 aaPredicted RBP9.65□□□□□ -0.86
LIMK2-201ENST00000331728 ZPR1O75312 459 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 CDR1P51861 262 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 TNNC1P63316 161 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 NPY5RQ15761 445 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 TUBB8Q3ZCM7 444 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 SFMBT2Q5VUG0 894 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 SPATA4Q8NEY3 305 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 TBCKQ8TEA7 893 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 SPAG5Q96R06 1193 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 CEP89Q96ST8 783 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 LRRC1Q9BTT6 524 aa9.65□□□□□ -0.86
LIMK2-201ENST00000331728 LRRC53A6NM62 1247 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 NCK2O43639 380 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 GUCY2FP51841 1108 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 KCTD16Q68DU8 428 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 EMBQ6PCB8 327 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 B4GALNT4Q76KP1 1039 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 OTUD6BQ8N6M0 293 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 LARP4BQ92615 738 aaKnown RBP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 RUBCNQ92622 972 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 NYXQ9GZU5 481 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 KBTBD4Q9NVX7 518 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 BARHL2Q9NY43 387 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 TIAM2Q8IVF5 1701 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 BCL9O00512 1426 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 PLEKP08567 350 aaPredicted RBP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 PRPHP41219 470 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 MEA1Q16626 185 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 MMGT1Q8N4V1 131 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 SLC44A5Q8NCS7 719 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 ZNF507Q8TCN5 953 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 CCDC43Q96MW1 224 aaKnown RBP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 EYA3Q99504 573 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 LSM14BQ9BX40 385 aaKnown RBP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 SH2D4AQ9H788 454 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 GUCY2DQ02846 1103 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 EVX2Q03828 476 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 SF3B2Q13435 895 aaKnown RBP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 LRRC41Q15345 812 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 NAALADL2Q58DX5 795 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 MYOCDQ8IZQ8 938 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 WDR66Q8TBY9 1149 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 ERGIC2Q96RQ1 377 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 DUSP9Q99956 384 aaKnown RBP9.64□□□□□ -0.87
LIMK2-201ENST00000331728 EHD4Q9H223 541 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 SMARCAL1Q9NZC9 954 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 TBC1D7Q9P0N9 293 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 SAMM50Q9Y512 469 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 CAPN6Q9Y6Q1 641 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 MYH13Q9UKX3 1938 aa9.64□□□□□ -0.87
LIMK2-201ENST00000331728 ZNF804BA4D1E1 1349 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 RCCD1A6NED2 376 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 WTIPA6NIX2 430 aaPredicted RBP9.63□□□□□ -0.87
LIMK2-201ENST00000331728 HEXIM1O94992 359 aaKnown RBP9.63□□□□□ -0.87
LIMK2-201ENST00000331728 SBK1Q52WX2 424 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 ALS2CLQ60I27 953 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 NELFCDQ8IXH7 590 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 KLHL7Q8IXQ5 586 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 TEX11Q8IYF3 940 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 TMEM47Q9BQJ4 181 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 UBA5Q9GZZ9 404 aa9.63□□□□□ -0.87
LIMK2-201ENST00000331728 LOC102724159A0A0B4J2E5 919 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms