RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 TRAF1Q13077 416 aa20.65■□□□□ 0.9
PTPMT1-201ENST00000326656 IFIT1BQ5T764 474 aaKnown RBP20.65■□□□□ 0.9
PTPMT1-201ENST00000326656 FBXO11Q86XK2 927 aa20.65■□□□□ 0.9
PTPMT1-201ENST00000326656 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.65■□□□□ 0.9
PTPMT1-201ENST00000326656 SAMD3Q8N6K7 520 aa20.65■□□□□ 0.9
PTPMT1-201ENST00000326656 CPVLQ9H3G5 476 aa20.65■□□□□ 0.9
PTPMT1-201ENST00000326656 JMJD4Q9H9V9 463 aa20.65■□□□□ 0.9
PTPMT1-201ENST00000326656 UNC80Q8N2C7 3258 aa20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 PDE4AP27815 886 aa20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 SEC23AQ15436 765 aa20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 QRICH1Q2TAL8 776 aa20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 NFRKBQ6P4R8 1299 aa20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 SYTL5Q8TDW5 730 aaPredicted RBP20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 TIFAQ96CG3 184 aa20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 AMNQ9BXJ7 453 aa20.64■□□□□ 0.89
PTPMT1-201ENST00000326656 SCN10AQ9Y5Y9 1956 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 DHX16O60231 1041 aaKnown RBP20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 MYL3P08590 195 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 ACRP10323 421 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 GSPT1P15170 499 aaKnown RBP20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 GHRHRQ02643 423 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 STXBP2Q15833 593 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 CCDC62Q6P9F0 684 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 MAFAQ8NHW3 353 aaPredicted RBP20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 MYLIPQ8WY64 445 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 RMDN3Q96TC7 470 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 ZNF576Q9H609 170 aa20.63■□□□□ 0.89
PTPMT1-201ENST00000326656 KLRF2D3W0D1 207 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 EIF3JO75822 258 aaKnown RBP20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 PFKMP08237 780 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 FOSL2P15408 326 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 TBC1D5Q92609 795 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 MTMR8Q96EF0 704 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 TAAR1Q96RJ0 339 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 IL25Q9H293 177 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 VAT1LQ9HCJ6 419 aa20.62■□□□□ 0.89
PTPMT1-201ENST00000326656 PALM3A6NDB9 673 aaPredicted RBP20.61■□□□□ 0.89
PTPMT1-201ENST00000326656 CHMLP26374 656 aa20.61■□□□□ 0.89
PTPMT1-201ENST00000326656 RAB30Q15771 203 aa20.61■□□□□ 0.89
PTPMT1-201ENST00000326656 NBPF20Q3BBV1 942 aa20.61■□□□□ 0.89
PTPMT1-201ENST00000326656 PBX4Q9BYU1 374 aa20.61■□□□□ 0.89
PTPMT1-201ENST00000326656 WNT8AQ9H1J5 351 aa20.61■□□□□ 0.89
PTPMT1-201ENST00000326656 KIAA1217Q5T5P2 1943 aa20.61■□□□□ 0.89
PTPMT1-201ENST00000326656 UMODL1Q5DID0 1318 aa20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 RFC2P35250 354 aa20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 CCL23P55773 120 aa20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 GRIN2CQ14957 1233 aa20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 TRMT13Q9NUP7 481 aaKnown RBP20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 COL20A1Q9P218 1284 aa20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 MSRAQ9UJ68 235 aa20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 CHD9Q3L8U1 2897 aa20.6■□□□□ 0.89
PTPMT1-201ENST00000326656 ERICH2A1L162 156 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 PITPNM1O00562 1244 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 ZBTB5O15062 677 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 GH1P01241 217 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 CYP21A2P08686 494 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 HSD17B4P51659 736 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 SART3Q15020 963 aaKnown RBP20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 ARHGEF16Q5VV41 709 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 CYB5R4Q7L1T6 521 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 STAG2Q8N3U4 1231 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 COPS5Q92905 334 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 EMID1Q96A84 441 aaPredicted RBP20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 MAD2L2Q9UI95 211 aa20.59■□□□□ 0.89
PTPMT1-201ENST00000326656 ARIH2O95376 493 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 CFBP00751 764 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 NR3C2P08235 984 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 KCNV1Q6PIU1 500 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 SEPT14Q6ZU15 432 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 STOX1Q6ZVD7 989 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 RALYLQ86SE5 291 aaKnown RBP20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 SESTD1Q86VW0 696 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 NCOA7Q8NI08 942 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 PXMP2Q9NR77 195 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 CXXC1Q9P0U4 656 aaPredicted RBP20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 PCDHA1Q9Y5I3 950 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 SLC4A7Q9Y6M7 1214 aa20.58■□□□□ 0.89
PTPMT1-201ENST00000326656 GRXCR1A8MXD5 290 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 IFIT3O14879 490 aaKnown RBP20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 SGSM2O43147 1006 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 CYP2C9P11712 490 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 CASTP20810 708 aaKnown RBP20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 PTH1RQ03431 593 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 ARHGAP1Q07960 439 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 GRM4Q14833 912 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 FAM47CQ5HY64 1035 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 OTOP2Q7RTS6 562 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 RETREG2Q8NC44 543 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 RIOX1Q9H6W3 641 aa20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 DDX41Q9UJV9 622 aaKnown RBP20.57■□□□□ 0.88
PTPMT1-201ENST00000326656 OPLAHO14841 1288 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 ACTN1P12814 892 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 PBX2P40425 430 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 BFSP2Q13515 415 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 LAMC2Q13753 1193 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 DGKDQ16760 1214 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 LY6KQ17RY6 165 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 MAP4K1Q92918 833 aa20.56■□□□□ 0.88
PTPMT1-201ENST00000326656 MTA3Q9BTC8 594 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms