RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0.01
SPAST-201ENST00000315285 SPATA24Q86W54 205 aa15.08■□□□□ 0.01
SPAST-201ENST00000315285 ZNF579Q8NAF0 562 aaKnown RBP15.08■□□□□ 0.01
SPAST-201ENST00000315285 BPIFA3Q9BQP9 254 aa15.08■□□□□ 0.01
SPAST-201ENST00000315285 NHEJ1Q9H9Q4 299 aaPredicted RBP15.08■□□□□ 0.01
SPAST-201ENST00000315285 BSDC1Q9NW68 430 aaPredicted RBP15.08■□□□□ 0.01
SPAST-201ENST00000315285 USP31Q70CQ4 1352 aa15.08■□□□□ 0
SPAST-201ENST00000315285 BUB1BO60566 1050 aaPredicted RBP15.08■□□□□ 0
SPAST-201ENST00000315285 VPS41P49754 854 aa15.08■□□□□ 0
SPAST-201ENST00000315285 ZNF131P52739 623 aa15.08■□□□□ 0
SPAST-201ENST00000315285 EPHB4P54760 987 aa15.08■□□□□ 0
SPAST-201ENST00000315285 RASA3Q14644 834 aa15.08■□□□□ 0
SPAST-201ENST00000315285 CCDC144BQ3MJ40 725 aa15.08■□□□□ 0
SPAST-201ENST00000315285 GNPTABQ3T906 1256 aa15.08■□□□□ 0
SPAST-201ENST00000315285 ARHGEF16Q5VV41 709 aa15.08■□□□□ 0
SPAST-201ENST00000315285 DGKHQ86XP1 1220 aa15.08■□□□□ 0
SPAST-201ENST00000315285 CRB1P82279 1406 aa15.08■□□□□ 0
SPAST-201ENST00000315285 RNF40O75150 1001 aa15.08■□□□□ 0
SPAST-201ENST00000315285 LIG4P49917 911 aa15.08■□□□□ 0
SPAST-201ENST00000315285 KCTD16Q68DU8 428 aa15.08■□□□□ 0
SPAST-201ENST00000315285 CCDC160A6NGH7 325 aa15.08■□□□□ 0
SPAST-201ENST00000315285 AFPP02771 609 aaKnown RBP15.08■□□□□ 0
SPAST-201ENST00000315285 LMNB1P20700 586 aa15.08■□□□□ 0
SPAST-201ENST00000315285 ADCY8P40145 1251 aa15.08■□□□□ 0
SPAST-201ENST00000315285 ITIH3Q06033 890 aa15.08■□□□□ 0
SPAST-201ENST00000315285 NEDD9Q14511 834 aa15.08■□□□□ 0
SPAST-201ENST00000315285 CAPN7Q9Y6W3 813 aa15.08■□□□□ 0
SPAST-201ENST00000315285 HEXIM1O94992 359 aaKnown RBP15.07■□□□□ 0
SPAST-201ENST00000315285 EIF4A3P38919 411 aaKnown RBP15.07■□□□□ 0
SPAST-201ENST00000315285 CYP27A1Q02318 531 aa15.07■□□□□ 0
SPAST-201ENST00000315285 GRK7Q8WTQ7 553 aa15.07■□□□□ 0
SPAST-201ENST00000315285 FAN1Q9Y2M0 1017 aa15.07■□□□□ 0
SPAST-201ENST00000315285 JRKLQ9Y4A0 524 aa15.07■□□□□ 0
SPAST-201ENST00000315285 SNAP23O00161 211 aa15.07■□□□□ 0
SPAST-201ENST00000315285 DLATP10515 647 aaKnown RBP15.07■□□□□ 0
SPAST-201ENST00000315285 HSPA1LP34931 641 aa15.07■□□□□ 0
SPAST-201ENST00000315285 KCNQ4P56696 695 aa15.07■□□□□ 0
SPAST-201ENST00000315285 LGSNQ5TDP6 509 aa15.07■□□□□ 0
SPAST-201ENST00000315285 MCUR1Q96AQ8 359 aa15.07■□□□□ 0
SPAST-201ENST00000315285 OSBPL5Q9H0X9 879 aaPredicted RBP15.07■□□□□ 0
SPAST-201ENST00000315285 STK10O94804 968 aaKnown RBP15.07■□□□□ 0
SPAST-201ENST00000315285 MYL7Q01449 175 aa15.07■□□□□ 0
SPAST-201ENST00000315285 SPATS2Q86XZ4 545 aaKnown RBP15.07■□□□□ 0
SPAST-201ENST00000315285 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
SPAST-201ENST00000315285 GDAQ9Y2T3 454 aa15.07■□□□□ 0
SPAST-201ENST00000315285 TRIM37O94972 964 aa15.07■□□□□ 0
SPAST-201ENST00000315285 TNFAIP1Q13829 316 aa15.07■□□□□ 0
SPAST-201ENST00000315285 GKAP1Q5VSY0 366 aaPredicted RBP15.07■□□□□ 0
SPAST-201ENST00000315285 SPICE1Q8N0Z3 855 aa15.07■□□□□ 0
SPAST-201ENST00000315285 SYNE4Q8N205 404 aa15.07■□□□□ 0
SPAST-201ENST00000315285 CCDC110Q8TBZ0 833 aa15.07■□□□□ 0
SPAST-201ENST00000315285 EPB41L5Q9HCM4 733 aa15.07■□□□□ 0
SPAST-201ENST00000315285 PSMC4P43686 418 aa15.06■□□□□ 0
SPAST-201ENST00000315285 PRKG1Q13976 671 aa15.06■□□□□ 0
SPAST-201ENST00000315285 FAM186BQ8IYM0 893 aa15.06■□□□□ 0
SPAST-201ENST00000315285 UHMK1Q8TAS1 419 aaKnown RBP15.06■□□□□ 0
SPAST-201ENST00000315285 P3H4Q92791 437 aa15.06■□□□□ 0
SPAST-201ENST00000315285 GLG1Q92896 1179 aa15.06■□□□□ 0
SPAST-201ENST00000315285 NDST4Q9H3R1 872 aa15.06■□□□□ 0
SPAST-201ENST00000315285 LY9Q9HBG7 655 aa15.06■□□□□ 0
SPAST-201ENST00000315285 SETD1BQ9UPS6 1966 aaKnown RBP15.06■□□□□ 0
SPAST-201ENST00000315285 APBA3O96018 575 aa15.06■□□□□ 0
SPAST-201ENST00000315285 GAP43P17677 238 aa15.06■□□□□ 0
SPAST-201ENST00000315285 CXCR5P32302 372 aa15.06■□□□□ 0
SPAST-201ENST00000315285 PCK1P35558 622 aa15.06■□□□□ 0
SPAST-201ENST00000315285 PSMC2P35998 433 aaKnown RBP15.06■□□□□ 0
SPAST-201ENST00000315285 C2orf54Q08AI8 447 aa15.06■□□□□ 0
SPAST-201ENST00000315285 MB21D1Q8N884 522 aa15.06■□□□□ 0
SPAST-201ENST00000315285 KANSL2Q9H9L4 492 aa15.06■□□□□ 0
SPAST-201ENST00000315285 RAB20Q9NX57 234 aa15.06■□□□□ 0
SPAST-201ENST00000315285 USP42Q9H9J4 1324 aaKnown RBP15.06■□□□□ 0
SPAST-201ENST00000315285 DAPK3O43293 454 aa15.06■□□□□ 0
SPAST-201ENST00000315285 BBOX1O75936 387 aa15.06■□□□□ 0
SPAST-201ENST00000315285 MOCS3O95396 460 aa15.06■□□□□ 0
SPAST-201ENST00000315285 YWHAEP62258 255 aaKnown RBP15.06■□□□□ 0
SPAST-201ENST00000315285 CCDC62Q6P9F0 684 aa15.06■□□□□ 0
SPAST-201ENST00000315285 ARHGEF2Q92974 986 aaKnown RBP15.06■□□□□ 0
SPAST-201ENST00000315285 BAIAP2L1Q9UHR4 511 aa15.06■□□□□ 0
SPAST-201ENST00000315285 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
SPAST-201ENST00000315285 CDC27P30260 824 aa15.06■□□□□ 0
SPAST-201ENST00000315285 NT5C2P49902 561 aa15.06■□□□□ 0
SPAST-201ENST00000315285 FAM196AQ6ZSG2 479 aa15.06■□□□□ 0
SPAST-201ENST00000315285 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
SPAST-201ENST00000315285 H0YCG3 227 aa15.05■□□□□ 0
SPAST-201ENST00000315285 PRPF6O94906 941 aaKnown RBP15.05■□□□□ 0
SPAST-201ENST00000315285 CCT5P48643 541 aa15.05■□□□□ 0
SPAST-201ENST00000315285 PSMD2Q13200 908 aa15.05■□□□□ 0
SPAST-201ENST00000315285 DMP1Q13316 513 aaPredicted RBP15.05■□□□□ 0
SPAST-201ENST00000315285 CUL4BQ13620 913 aa15.05■□□□□ 0
SPAST-201ENST00000315285 FAM133AQ8N9E0 248 aa15.05■□□□□ 0
SPAST-201ENST00000315285 TRIM6Q9C030 488 aaPredicted RBP15.05■□□□□ 0
SPAST-201ENST00000315285 RNF14Q9UBS8 474 aa15.05■□□□□ 0
SPAST-201ENST00000315285 CCPG1Q9ULG6 757 aa15.05■□□□□ 0
SPAST-201ENST00000315285 PNMA6AP0CW24 399 aaPredicted RBP15.05■□□□□ 0
SPAST-201ENST00000315285 GBP1P32455 592 aa15.05■□□□□ 0
SPAST-201ENST00000315285 AOC3Q16853 763 aa15.05■□□□□ 0
SPAST-201ENST00000315285 TTC19Q6DKK2 380 aaPredicted RBP15.05■□□□□ 0
SPAST-201ENST00000315285 SH3GLB2Q9NR46 395 aa15.05■□□□□ 0
SPAST-201ENST00000315285 EMILIN3Q9NT22 766 aa15.05■□□□□ 0
SPAST-201ENST00000315285 CDHR2Q9BYE9 1310 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms