RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 AK8Q96MA6 479 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 ALS2CR12Q96Q35 445 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 ARID3AQ99856 593 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 ANKFY1Q9P2R3 1169 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 MANSC4A6NHS7 340 aaPredicted RBP10.27□□□□□ -0.77
PTPRE-202ENST00000306042 ZNF543Q08ER8 600 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 GOLGA1Q92805 767 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.27□□□□□ -0.77
PTPRE-202ENST00000306042 NACA2Q9H009 215 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 TBC1D22BQ9NU19 505 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 SERTAD1Q9UHV2 236 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 INPP5BP32019 993 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 ADALQ6DHV7 355 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 ANKRD13CQ8N6S4 541 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 GOLGA5Q8TBA6 731 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 ACBD3Q9H3P7 528 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 PANK4Q9NVE7 773 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 NUB1Q9Y5A7 615 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 XPOTO43592 962 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 VIL1P09327 827 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 GCLCP48506 637 aaPredicted RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 CYP2J2P51589 502 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 MYL5Q02045 173 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 IFI16Q16666 785 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 TTBK2Q6IQ55 1244 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 SLC17A8Q8NDX2 589 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 KIFAP3Q92845 792 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 RTFDC1Q9BY42 306 aaPredicted RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 KCNQ5Q9NR82 932 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 HNRNPDLO14979 420 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 TLR3O15455 904 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 ATF7P17544 494 aaPredicted RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 CYLC1P35663 651 aaPredicted RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 FKBP1AP62942 108 aaKnown RBP10.26□□□□□ -0.77
PTPRE-202ENST00000306042 KCNV1Q6PIU1 500 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 SESTD1Q86VW0 696 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 FAM43AQ8N2R8 423 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 CDCA5Q96FF9 252 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 NOX5Q96PH1 765 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 PARP2Q9UGN5 583 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 TNNC2P02585 160 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 MYOCDQ8IZQ8 938 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 MLKLQ8NB16 471 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 SPATA33Q96N06 139 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 MON2Q7Z3U7 1717 aa10.26□□□□□ -0.77
PTPRE-202ENST00000306042 TXNP10599 105 aaKnown RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 KRT76Q01546 638 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 BRPF3Q9ULD4 1205 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 GLTPD2A6NH11 291 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 WDR64B1ANS9 1081 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 CD19P15391 556 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 BACE1P56817 501 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 SNX16P57768 344 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 ARHGAP4P98171 946 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PRPF4BQ13523 1007 aaKnown RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 BAATQ14032 418 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 CRY2Q49AN0 593 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 ARMCX5Q6P1M9 558 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 LARP4BQ92615 738 aaKnown RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 SYMPKQ92797 1274 aaKnown RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 AIFM3Q96NN9 605 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PPP1R16BQ96T49 567 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PLVAPQ9BX97 442 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PRR12Q9ULL5 1215 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 SALL1Q9NSC2 1324 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 C6orf222P0C671 652 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 TMEM191BP0C7N4 346 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 KIF23Q02241 960 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 ATG4CQ96DT6 458 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 ZSWIM4Q9H7M6 989 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 KMT5AQ9NQR1 393 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PRDM5Q9NQX1 630 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 ZBBXA8MT70 800 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PFKFB1P16118 471 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 ACTN2P35609 894 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 KARSQ15046 597 aaKnown RBP10.25□□□□□ -0.77
PTPRE-202ENST00000306042 FAM26FQ5R3K3 315 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 CCDC155Q8N6L0 562 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 POMGNT1Q8WZA1 660 aa10.25□□□□□ -0.77
PTPRE-202ENST00000306042 PDS5AQ29RF7 1337 aaKnown RBP10.24□□□□□ -0.77
PTPRE-202ENST00000306042 MEIS1O00470 390 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 BRD1O95696 1058 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 UVSSAQ2YD98 709 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 DEFB115Q30KQ5 88 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 CHST13Q8NET6 341 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 ERCC4Q92889 916 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-202ENST00000306042 EPB41L4AQ9HCS5 686 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-202ENST00000306042 PFASO15067 1338 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 SYNRGQ9UMZ2 1314 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 AHDC1Q5TGY3 1603 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-202ENST00000306042 DDTLA6NHG4 134 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-202ENST00000306042 CHGBP05060 677 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 SGMS1Q86VZ5 419 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms