RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 HACE1Q8IYU2 909 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 SAMSN1Q9NSI8 373 aaKnown RBP15.21■□□□□ 0.03
PRKCB-201ENST00000303531 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 BBOF1Q8ND07 529 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 SOWAHDA6NJG2 315 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 CAPN9O14815 690 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 CEP120Q8N960 986 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 ACRBPQ8NEB7 543 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 TBCKQ8TEA7 893 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 RIPOR2Q9Y4F9 1068 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 MFAP3P55082 362 aa15.21■□□□□ 0.02
PRKCB-201ENST00000303531 RESTQ13127 1097 aa15.21■□□□□ 0.02
PRKCB-201ENST00000303531 MAN2A1Q16706 1144 aa15.21■□□□□ 0.02
PRKCB-201ENST00000303531 KCTD1Q719H9 257 aa15.21■□□□□ 0.02
PRKCB-201ENST00000303531 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.02
PRKCB-201ENST00000303531 SEPT10Q9P0V9 454 aa15.21■□□□□ 0.02
PRKCB-201ENST00000303531 IL6STP40189 918 aaPredicted RBP15.21■□□□□ 0.02
PRKCB-201ENST00000303531 CCT5P48643 541 aa15.21■□□□□ 0.02
PRKCB-201ENST00000303531 AFPP02771 609 aaKnown RBP15.2■□□□□ 0.02
PRKCB-201ENST00000303531 POLR2BP30876 1174 aaKnown RBP15.2■□□□□ 0.02
PRKCB-201ENST00000303531 UBXN2AP68543 259 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 ANKRD35Q8N283 1001 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 ANO3Q9BYT9 981 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 PTK2Q05397 1052 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 TTLL1O95922 423 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 HESX1Q9UBX0 185 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 CDC25AP30304 524 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 PTPN12Q05209 780 aaKnown RBP15.2■□□□□ 0.02
PRKCB-201ENST00000303531 MAGOHBQ96A72 148 aaKnown RBP15.2■□□□□ 0.02
PRKCB-201ENST00000303531 ADPGKQ9BRR6 497 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 BCAP29Q9UHQ4 241 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 YEATS2Q9ULM3 1422 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 HIP1RO75146 1068 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 PSMC2P35998 433 aaKnown RBP15.2■□□□□ 0.02
PRKCB-201ENST00000303531 FAM114A2Q9NRY5 505 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 RWDD2AQ9UIY3 292 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 NXNQ6DKJ4 435 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 ARHGEF25Q86VW2 580 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 EPB41L5Q9HCM4 733 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
PRKCB-201ENST00000303531 HNRNPDLO14979 420 aaKnown RBP15.19■□□□□ 0.02
PRKCB-201ENST00000303531 HEXIM1O94992 359 aaKnown RBP15.19■□□□□ 0.02
PRKCB-201ENST00000303531 NT5C1BQ96P26 610 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 MYO1FO00160 1098 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 C2orf54Q08AI8 447 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 PIGSQ96S52 555 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 ZSWIM5Q9P217 1185 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 RNF8O76064 485 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 IFNAR1P17181 557 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 EPHB4P54760 987 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 RPS6KA2Q15349 733 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 SH2D4BQ5SQS7 431 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 VSTM4Q8IW00 320 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 FAM186BQ8IYM0 893 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 ENOX1Q8TC92 643 aaKnown RBP15.19■□□□□ 0.02
PRKCB-201ENST00000303531 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 ZNF577Q9BSK1 485 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 EFCC1Q9HA90 598 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 ATG3Q9NT62 314 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 LEMD3Q9Y2U8 911 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 KDM6BO15054 1643 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 TRIM68Q6AZZ1 485 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 PCDHB6Q9Y5E3 794 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 ATP8B1O43520 1251 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 MAP2K2P36507 400 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 PHLDB3Q6NSJ2 640 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 GSDMBQ8TAX9 411 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 PI4K2BQ8TCG2 481 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 RUNDC3BQ96NL0 473 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 MIS12Q9H081 205 aa15.19■□□□□ 0.02
PRKCB-201ENST00000303531 SLC16A2P36021 539 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 DCAF15Q66K64 600 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 LRRC8CQ8TDW0 803 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■□□□□ 9.5
PRKCB-201ENST00000303531 CLTAP09496 248 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 FKBP3Q00688 224 aaKnown RBP15.18■□□□□ 0.02
PRKCB-201ENST00000303531 RNF169Q8NCN4 708 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 CXCR5P32302 372 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 IFNAR2P48551 515 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 TTBK2Q6IQ55 1244 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 AIFM3Q96NN9 605 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 SRPRBQ9Y5M8 271 aaKnown RBP15.18■□□□□ 0.02
PRKCB-201ENST00000303531 USP6P35125 1406 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 NEO1Q92859 1461 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 POC1B-GALNT4F8VUJ3 575 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 GAP43P17677 238 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 PCDHB4Q9Y5E5 795 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 SASH1O94885 1247 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 BPIFB4P59827 614 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 FAM133AQ8N9E0 248 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 MAD1L1Q9Y6D9 718 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 MOCS3O95396 460 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 TMOD1P28289 359 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 TBC1D10BQ4KMP7 808 aaPredicted RBP15.18■□□□□ 0.02
PRKCB-201ENST00000303531 NME8Q8N427 588 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 MICAL1Q8TDZ2 1067 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 INTS9Q9NV88 658 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms