RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 CYFIP2Q96F07 1278 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 SEC16BQ96JE7 1060 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 MAGEF1Q9HAY2 307 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 ETNK1Q9HBU6 452 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 ANKIB1Q9P2G1 1089 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 LGALS16A8MUM7 142 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 KRT5P13647 590 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 BBOF1Q8ND07 529 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 PITPNM3Q9BZ71 974 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 TAF1DQ9H5J8 278 aaPredicted RBP18.66■□□□□ 0.58
TRIM9-201ENST00000298355 MLXIPQ9HAP2 919 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 PTPN22Q9Y2R2 807 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 BLIDQ8IZY5 108 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 LRRN4CLQ8ND94 238 aa18.66■□□□□ 0.58
TRIM9-201ENST00000298355 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
TRIM9-201ENST00000298355 SASH3O75995 380 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 CCND1P24385 295 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 PLS1Q14651 629 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 CALCRLQ16602 461 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 ARHGAP44Q17R89 818 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 DYDC2Q96IM9 177 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 EPSTI1Q96J88 318 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 GJB4Q9NTQ9 266 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 AGTPBP1Q9UPW5 1226 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 SART1O43290 800 aaKnown RBP18.65■□□□□ 0.58
TRIM9-201ENST00000298355 PTPREP23469 700 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 PHBP35232 272 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 DR1Q01658 176 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 MORC4Q8TE76 937 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 COPRSQ9NQ92 184 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 ARMCX3Q9UH62 379 aaPredicted RBP18.65■□□□□ 0.58
TRIM9-201ENST00000298355 SAMD9LQ8IVG5 1584 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 ZRANB2O95218 330 aaKnown RBP eCLIP18.65■□□□□ 0.58
TRIM9-201ENST00000298355 SEC24CP53992 1094 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 NR5A1Q13285 461 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 NSMCE1Q8WV22 266 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 NOD2Q9HC29 1040 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 MAST3O60307 1309 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 CDHR2Q9BYE9 1310 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 FAM170AA1A519 330 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 SERPING1P05155 500 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 GSTO1P78417 241 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 ITIH3Q06033 890 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 PTGISQ16647 500 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 LIN9Q5TKA1 542 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 RAD9BQ6WBX8 426 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 RSRC2Q7L4I2 434 aaKnown RBP18.65■□□□□ 0.58
TRIM9-201ENST00000298355 INTUQ9ULD6 942 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 LRRIQ3A6PVS8 624 aaPredicted RBP18.65■□□□□ 0.58
TRIM9-201ENST00000298355 CCDC93Q567U6 631 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 FOXR1Q6PIV2 292 aa18.65■□□□□ 0.58
TRIM9-201ENST00000298355 CCNE1P24864 410 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 WDR93Q6P2C0 686 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 CEP70Q8NHQ1 597 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 NUDCD1Q96RS6 583 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 POC1B-GALNT4F8VUJ3 575 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 PALMO75781 387 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 VCPKMTQ9H867 229 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 ATP10AO60312 1499 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 RCN2Q14257 317 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 IL17REQ8NFR9 667 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 CUEDC2Q9H467 287 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 POLD4Q9HCU8 107 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 AATFQ9NY61 560 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRIM9-201ENST00000298355 MED14O60244 1454 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 A0A1B0GTH6 734 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 TTC26A0AVF1 554 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 RBM43Q6ZSC3 357 aaKnown RBP18.64■□□□□ 0.57
TRIM9-201ENST00000298355 CAPN12Q6ZSI9 719 aa18.64■□□□□ 0.57
TRIM9-201ENST00000298355 KLC1Q07866 573 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 C10orf76Q5T2E6 689 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 ZNF185O15231 689 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 PRR29P0C7W0 189 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 GRID2IPA4D2P6 1211 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 MYL1P05976 194 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 ESRRAP11474 423 aaPredicted RBP18.63■□□□□ 0.57
TRIM9-201ENST00000298355 TRAPPC10P48553 1259 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 PALM2Q8IXS6 379 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.63■□□□□ 0.57
TRIM9-201ENST00000298355 RIC8AQ9NPQ8 531 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 SNX12Q9UMY4 172 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 HSPA6P17066 643 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 ZNF790Q6PG37 636 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 IFNL3Q8IZI9 196 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 ZNF579Q8NAF0 562 aaKnown RBP18.63■□□□□ 0.57
TRIM9-201ENST00000298355 PIK3R5Q8WYR1 880 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 TBK1Q9UHD2 729 aa18.63■□□□□ 0.57
TRIM9-201ENST00000298355 NCK2O43639 380 aa18.62■□□□□ 0.57
TRIM9-201ENST00000298355 HNRNPCP07910 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRIM9-201ENST00000298355 TMED2Q15363 201 aa18.62■□□□□ 0.57
TRIM9-201ENST00000298355 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
TRIM9-201ENST00000298355 PAX7P23759 505 aa18.62■□□□□ 0.57
TRIM9-201ENST00000298355 CCDC92Q53HC0 331 aaPredicted RBP18.62■□□□□ 0.57
TRIM9-201ENST00000298355 OLFM3Q96PB7 478 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms