RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 GNA11P29992 359 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 EIF4A3P38919 411 aaKnown RBP27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 GPSM2P81274 684 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 SLC7A5Q01650 507 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 SV2BQ7L1I2 683 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 DEF6Q9H4E7 631 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 CCNL1Q9UK58 526 aaPredicted RBP27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 RREB1Q92766 1687 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 RNF40O75150 1001 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 MYL1P05976 194 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 ACTN2P35609 894 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 SPA17Q15506 151 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 CALCRLQ16602 461 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 TMC4Q7Z404 712 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 AK8Q96MA6 479 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 SPZ1Q9BXG8 430 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 IFIH1Q9BYX4 1025 aaKnown RBP27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 TANGO6Q9C0B7 1094 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 SYF2O95926 243 aaKnown RBP27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 NFRKBQ6P4R8 1299 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 NOC3LQ8WTT2 800 aaKnown RBP27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 CDK5RAP3Q96JB5 506 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 NUP58Q9BVL2 599 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 NDST4Q9H3R1 872 aa27.14■■□□□ 1.94
SPTSSA-201ENST00000298130 SNED1Q8TER0 1413 aa27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 LRRC53A6NM62 1247 aa27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 EDIL3O43854 480 aa27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 UFL1O94874 794 aa27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 SSBP05455 408 aaKnown RBP eCLIP27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 TNNI2P48788 182 aa27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 CACNB1Q02641 598 aaPredicted RBP27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 ENOX2Q16206 610 aaKnown RBP27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 CNNM4Q6P4Q7 775 aa27.14■■□□□ 1.93
SPTSSA-201ENST00000298130 CNTNAP4Q9C0A0 1308 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 VAV2P52735 878 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 ECM1Q16610 540 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 VWA3BQ502W6 1294 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 NLRC4Q9NPP4 1024 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 SALL4Q9UJQ4 1053 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 WNK3Q9BYP7 1800 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 GSTO1P78417 241 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 TRIM34Q9BYJ4 488 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 PCDHA13Q9Y5I0 950 aa27.13■■□□□ 1.93
SPTSSA-201ENST00000298130 BUB1O43683 1085 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 AKR1B10O60218 316 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 GRAPQ13588 217 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 ZNF804AQ7Z570 1209 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 FAM114A1Q8IWE2 563 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 GRAPLQ8TC17 118 aaPredicted RBP27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 LARP4BQ92615 738 aaKnown RBP27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 HPCAL4Q9UM19 191 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 KIF11P52732 1056 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 PPP4CP60510 307 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 AMPD3Q01432 767 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 LEKR1Q6ZMV7 388 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 C16orf86Q6ZW13 317 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 NEDD1Q8NHV4 660 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 GOLGA5Q8TBA6 731 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 CD209Q9NNX6 404 aa27.12■■□□□ 1.93
SPTSSA-201ENST00000298130 ROBO3Q96MS0 1386 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 TULP2O00295 520 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 GGCXP38435 758 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 GFPT1Q06210 699 aaPredicted RBP27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 MFSD14BQ5SR56 506 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 ZSCAN29Q8IWY8 852 aaPredicted RBP27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 C10orf67Q8IYJ2 551 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 FAM71BQ8TC56 605 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 SNX29Q8TEQ0 813 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 ERGIC2Q96RQ1 377 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 CUEDC2Q9H467 287 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 TMEM51Q9NW97 253 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 CCDC88AQ3V6T2 1871 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 RAD21O60216 631 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 TUBB4BP68371 445 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 KCTD19Q17RG1 926 aaPredicted RBP27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 CENPPQ6IPU0 288 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 CCDC170Q8IYT3 715 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 LRRC1Q9BTT6 524 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 FGFBP2Q9BYJ0 223 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 DMGDHQ9UI17 866 aaKnown RBP27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 SIK3Q9Y2K2 1263 aa27.11■■□□□ 1.93
SPTSSA-201ENST00000298130 RFC4P35249 363 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 SLC16A2P36021 539 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 DDX12PQ92771 950 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 CRACR2AQ9BSW2 395 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 RABEP2Q9H5N1 569 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 MUM1L1Q5H9M0 696 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 BARGINQ6ZT62 677 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 C8orf37Q96NL8 207 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 SELENOOQ9BVL4 669 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 PSD3Q9NYI0 1048 aa27.1■■□□□ 1.93
SPTSSA-201ENST00000298130 LDHCP07864 332 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 TTBK2Q6IQ55 1244 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 CREG2Q8IUH2 290 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 RETREG2Q8NC44 543 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 EHBP1Q8NDI1 1231 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 LZTS2Q9BRK4 669 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 PDHBP11177 359 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 NAP1L1P55209 391 aaKnown RBP27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 RASSF7Q02833 373 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms