RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 CCNE1P24864 410 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 EEF1GP26641 437 aaKnown RBP14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 TUBB2AQ13885 445 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 TRAPPC11Q7Z392 1133 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 TEX11Q8IYF3 940 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 FAM133AQ8N9E0 248 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 TRIM58Q8NG06 486 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 EYA3Q99504 573 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 TUBB2BQ9BVA1 445 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 TDP2O95551 362 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 PNPLA7Q6ZV29 1317 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 SH3RF1Q7Z6J0 888 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 REXO1Q8N1G1 1221 aaKnown RBP14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 OR2W6PQ8NHA6 318 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 TRPM3Q9HCF6 1732 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 CAPN11Q9UMQ6 739 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 AFDNP55196 1824 aaKnown RBP14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 SLURP2P0DP57 97 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 PBX1P40424 430 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 ICE2Q659A1 982 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 CNNM4Q6P4Q7 775 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 NSUN4Q96CB9 384 aaKnown RBP14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 NOX5Q96PH1 765 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 DPH5Q9H2P9 285 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 EFCC1Q9HA90 598 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 RBM12Q9NTZ6 932 aaKnown RBP14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 PCDHA6Q9UN73 950 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 PCDHA8Q9Y5H6 950 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 E7EVH7 732 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 MEIS1O00470 390 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 GNPATO15228 680 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 USP8P40818 1118 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 SNAP25P60880 206 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 TUBB4BP68371 445 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 SLC20A2Q08357 652 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 IFFO1Q0D2I5 559 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 PACS2Q86VP3 889 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 CEP57Q86XR8 500 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 HNRNPLLQ8WVV9 542 aaKnown RBP14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 TMEM47Q9BQJ4 181 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 TRIM9Q9C026 710 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 MYO1AQ9UBC5 1043 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 RAB21Q9UL25 225 aa14.73□□□□□ -0.05
TNFRSF21-201ENST00000296861 PPFIA4O75335 1185 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 BAG3O95817 575 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 TUBBP07437 444 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 CARSP49589 748 aaKnown RBP14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 SEC24CP53992 1094 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 ITPK1Q13572 414 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 PARP10Q53GL7 1025 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 CCNI2Q6ZMN8 369 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 NEK8Q86SG6 692 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 SPATA20Q8TB22 786 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 OSBPL9Q96SU4 736 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 UBXN6Q9BZV1 441 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 FAM169AQ9Y6X4 670 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 OPA1O60313 960 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 RBM5P52756 815 aaKnown RBP eCLIP14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 KLHL30Q0D2K2 578 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 NNTQ13423 1086 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 NAALADL2Q58DX5 795 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 DDX42Q86XP3 938 aaKnown RBP eCLIP14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 STRCP1A6NGW2 1772 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 NPHP3-ACAD11A0A0J9YXS1 232 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 TMEM110-MUSTN1A8MSY1 372 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 SEMA3EO15041 775 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 SYF2O95926 243 aaKnown RBP14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 ABCB4P21439 1286 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 TRADDQ15628 312 aa14.72□□□□□ -0.05
TNFRSF21-201ENST00000296861 PALMO75781 387 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 CYP4A11Q02928 519 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 FUT2Q10981 343 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 TBC1D10BQ4KMP7 808 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 RDH13Q8NBN7 331 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 GNA11P29992 359 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 GNAQP50148 359 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 MEX3CQ5U5Q3 659 aaKnown RBP14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 NUP58Q9BVL2 599 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 FAM184BQ9ULE4 1060 aa14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.71□□□□□ -0.05
TNFRSF21-201ENST00000296861 IFT88Q13099 833 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 NPY5RQ15761 445 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 TTI2Q6NXR4 508 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 MAEAQ7L5Y9 396 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 ZNF512BQ96KM6 892 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 ARHGAP20Q9P2F6 1191 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L5A8MUK1 530 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 IRAK1P51617 712 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 UBE4AQ14139 1066 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 SLC9C1Q4G0N8 1177 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 DUSP9Q99956 384 aaKnown RBP14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 GOLGA6L7A0A1B0GV03 622 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 FAM196BA6NMK8 535 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 SRGNP10124 158 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 AMPD2Q01433 879 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 CFAP221Q4G0U5 840 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 LARP4BQ92615 738 aaKnown RBP14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 THAP9Q9H5L6 903 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms