RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 NAPAP54920 295 aa30.96■■■□□ 2.55
SSU72-201ENST00000291386 SOX10P56693 466 aa30.96■■■□□ 2.55
SSU72-201ENST00000291386 LHX8Q68G74 356 aa30.96■■■□□ 2.55
SSU72-201ENST00000291386 CUL5Q93034 780 aa30.96■■■□□ 2.55
SSU72-201ENST00000291386 ZSCAN31Q96LW9 406 aaPredicted RBP30.96■■■□□ 2.55
SSU72-201ENST00000291386 FRMPD3Q5JV73 1810 aa30.96■■■□□ 2.55
SSU72-201ENST00000291386 ST18O60284 1047 aa30.95■■■□□ 2.55
SSU72-201ENST00000291386 DEXIO95424 95 aa30.95■■■□□ 2.55
SSU72-201ENST00000291386 CNGA1P29973 690 aa30.95■■■□□ 2.55
SSU72-201ENST00000291386 GLT8D2Q9H1C3 349 aa30.95■■■□□ 2.55
SSU72-201ENST00000291386 VTA1Q9NP79 307 aa30.95■■■□□ 2.55
SSU72-201ENST00000291386 PXMP2Q9NR77 195 aa30.95■■■□□ 2.55
SSU72-201ENST00000291386 STK36Q9NRP7 1315 aa30.95■■■□□ 2.54
SSU72-201ENST00000291386 ESYT2A0FGR8 921 aa30.94■■■□□ 2.54
SSU72-201ENST00000291386 ARHGEF16Q5VV41 709 aa30.94■■■□□ 2.54
SSU72-201ENST00000291386 SMARCC2Q8TAQ2 1214 aa30.94■■■□□ 2.54
SSU72-201ENST00000291386 RIC8AQ9NPQ8 531 aa30.94■■■□□ 2.54
SSU72-201ENST00000291386 FRMPD4Q14CM0 1322 aa30.94■■■□□ 2.54
SSU72-201ENST00000291386 CTDNEP1O95476 244 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 AKR1A1P14550 325 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 USP17L6PQ6QN14 398 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 NECAB1Q8N987 351 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 CCDC12Q8WUD4 166 aaPredicted RBP30.93■■■□□ 2.54
SSU72-201ENST00000291386 SHISA4Q96DD7 197 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 SH3GLB2Q9NR46 395 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 ZHX1Q9UKY1 873 aaPredicted RBP30.93■■■□□ 2.54
SSU72-201ENST00000291386 OGDHLQ9ULD0 1010 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 FAM184BQ9ULE4 1060 aa30.93■■■□□ 2.54
SSU72-201ENST00000291386 PDE4DQ08499 809 aa30.92■■■□□ 2.54
SSU72-201ENST00000291386 FAM177A1Q8N128 213 aaPredicted RBP30.92■■■□□ 2.54
SSU72-201ENST00000291386 PDCD2LQ9BRP1 358 aa30.92■■■□□ 2.54
SSU72-201ENST00000291386 ZMYND12Q9H0C1 365 aa30.92■■■□□ 2.54
SSU72-201ENST00000291386 SH2B1Q9NRF2 756 aaPredicted RBP30.92■■■□□ 2.54
SSU72-201ENST00000291386 DDX49Q9Y6V7 483 aaKnown RBP30.92■■■□□ 2.54
SSU72-201ENST00000291386 SMCO2A6NFE2 343 aa30.91■■■□□ 2.54
SSU72-201ENST00000291386 PPFIA3O75145 1194 aa30.91■■■□□ 2.54
SSU72-201ENST00000291386 EN2P19622 333 aaPredicted RBP30.91■■■□□ 2.54
SSU72-201ENST00000291386 TAPT1Q6NXT6 567 aa30.91■■■□□ 2.54
SSU72-201ENST00000291386 FCHSD1Q86WN1 690 aa30.91■■■□□ 2.54
SSU72-201ENST00000291386 RBM47A0AV96 593 aaKnown RBP30.9■■■□□ 2.54
SSU72-201ENST00000291386 NR3C2P08235 984 aa30.9■■■□□ 2.54
SSU72-201ENST00000291386 EIF2AK2P19525 551 aaKnown RBP30.9■■■□□ 2.54
SSU72-201ENST00000291386 ADCY7P51828 1080 aa30.9■■■□□ 2.54
SSU72-201ENST00000291386 ST3GAL1Q11201 340 aa30.9■■■□□ 2.54
SSU72-201ENST00000291386 CCDC148Q8NFR7 591 aa30.9■■■□□ 2.54
SSU72-201ENST00000291386 TFRCP02786 760 aaKnown RBP30.89■■■□□ 2.54
SSU72-201ENST00000291386 PGM5Q15124 567 aa30.89■■■□□ 2.54
SSU72-201ENST00000291386 STXBP2Q15833 593 aa30.89■■■□□ 2.54
SSU72-201ENST00000291386 CCDC144BQ3MJ40 725 aa30.89■■■□□ 2.54
SSU72-201ENST00000291386 FBXO16Q8IX29 292 aaPredicted RBP30.89■■■□□ 2.54
SSU72-201ENST00000291386 ANKLE1Q8NAG6 615 aa30.89■■■□□ 2.54
SSU72-201ENST00000291386 MCM2P49736 904 aa30.88■■■□□ 2.53
SSU72-201ENST00000291386 CLK2P49760 499 aaKnown RBP30.88■■■□□ 2.53
SSU72-201ENST00000291386 RGS19P49795 217 aa30.88■■■□□ 2.53
SSU72-201ENST00000291386 IFFO2Q5TF58 517 aa30.88■■■□□ 2.53
SSU72-201ENST00000291386 IQSEC1Q6DN90 963 aa30.88■■■□□ 2.53
SSU72-201ENST00000291386 EEPD1Q7L9B9 569 aa30.88■■■□□ 2.53
SSU72-201ENST00000291386 VSIG10LQ86VR7 867 aa30.88■■■□□ 2.53
SSU72-201ENST00000291386 NSUN7Q8NE18 718 aaKnown RBP30.88■■■□□ 2.53
SSU72-201ENST00000291386 C6orf50Q9HD87 102 aa30.88■■■□□ 2.53
SSU72-201ENST00000291386 KIAA1217Q5T5P2 1943 aa30.87■■■□□ 2.53
SSU72-201ENST00000291386 CAPN15O75808 1086 aa30.87■■■□□ 2.53
SSU72-201ENST00000291386 EIF3JO75822 258 aaKnown RBP30.87■■■□□ 2.53
SSU72-201ENST00000291386 RARBP10826 455 aa30.87■■■□□ 2.53
SSU72-201ENST00000291386 GNA11P29992 359 aa30.87■■■□□ 2.53
SSU72-201ENST00000291386 UBE2SQ16763 222 aa30.87■■■□□ 2.53
SSU72-201ENST00000291386 DUSP11O75319 330 aaKnown RBP30.86■■■□□ 2.53
SSU72-201ENST00000291386 FOSP01100 380 aaPredicted RBP30.86■■■□□ 2.53
SSU72-201ENST00000291386 LLPHQ9BRT6 129 aaKnown RBP30.86■■■□□ 2.53
SSU72-201ENST00000291386 PDGFCQ9NRA1 345 aa30.86■■■□□ 2.53
SSU72-201ENST00000291386 VPS54Q9P1Q0 977 aa30.86■■■□□ 2.53
SSU72-201ENST00000291386 SPDYE3A6NKU9 549 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 FDPSP14324 419 aaKnown RBP30.85■■■□□ 2.53
SSU72-201ENST00000291386 ADCYAP1R1P41586 468 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 AP3B2Q13367 1082 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 MCTP2Q6DN12 878 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 XRRA1Q6P2D8 792 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 WASF1Q92558 559 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 ORC3Q9UBD5 711 aaPredicted RBP30.85■■■□□ 2.53
SSU72-201ENST00000291386 PCDHA6Q9UN73 950 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 PCDHA8Q9Y5H6 950 aa30.85■■■□□ 2.53
SSU72-201ENST00000291386 ADCY6O43306 1168 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 CD2BP2O95400 341 aaKnown RBP30.84■■■□□ 2.53
SSU72-201ENST00000291386 CCND2P30279 289 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 TNFAIP2Q03169 654 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 CCDC83Q8IWF9 413 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 IL31RAQ8NI17 732 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 BICD2Q8TD16 824 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 GNEQ9Y223 722 aaKnown RBP30.84■■■□□ 2.53
SSU72-201ENST00000291386 Q9Y3F1 56 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 BRCA2P51587 3418 aa30.84■■■□□ 2.53
SSU72-201ENST00000291386 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.83■■■□□ 2.53
SSU72-201ENST00000291386 STAM2O75886 525 aa30.83■■■□□ 2.53
SSU72-201ENST00000291386 NKX3-2P78367 333 aa30.83■■■□□ 2.53
SSU72-201ENST00000291386 ANO1Q5XXA6 986 aa30.83■■■□□ 2.53
SSU72-201ENST00000291386 PCNX4Q63HM2 1172 aa30.83■■■□□ 2.53
SSU72-201ENST00000291386 UBE2Q1Q7Z7E8 422 aa30.83■■■□□ 2.53
SSU72-201ENST00000291386 SCFD2Q8WU76 684 aa30.83■■■□□ 2.53
SSU72-201ENST00000291386 XPNPEP3Q9NQH7 507 aa30.83■■■□□ 2.53
SSU72-201ENST00000291386 MYCLP12524 364 aaPredicted RBP30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms