RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PSMB7Q99436 277 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 LRRC1Q9BTT6 524 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 SIK3Q9Y2K2 1263 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 ANKRD65E5RJM6 399 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 PPFIA4O75335 1185 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 HNRNPH3P31942 346 aaKnown RBP14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 MATR3P43243 847 aaKnown RBP eCLIP14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 DIXDC1Q155Q3 683 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 SLC10A5Q5PT55 438 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 NFRKBQ6P4R8 1299 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 LINC00116Q8NCU8 138 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 RRP36Q96EU6 259 aaKnown RBP14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 NDST4Q9H3R1 872 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 DEF6Q9H4E7 631 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 MMRN2Q9H8L6 949 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 SMARCAL1Q9NZC9 954 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 SAP30BPQ9UHR5 308 aaKnown RBP14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 DMGDHQ9UI17 866 aaKnown RBP14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 SBF2Q86WG5 1849 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 KCNQ2O43526 872 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 CXCR5P32302 372 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 CENPPQ6IPU0 288 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 SND1Q7KZF4 910 aaKnown RBP eCLIP14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 TGFBRAP1Q8WUH2 860 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 CALML4Q96GE6 196 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 NLRP3Q96P20 1036 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 CDK5RAP2Q96SN8 1893 aa14.71□□□□□ -0.05
SLC28A1-201ENST00000286749 AKR1B10O60218 316 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 LDHBP07195 334 aaKnown RBP14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 ERCC3P19447 782 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 RASA1P20936 1047 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 TXKP42681 527 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 SKIDA1Q1XH10 827 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 TMED8Q6PL24 325 aaPredicted RBP14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 AMOTL1Q8IY63 956 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 SPATA4Q8NEY3 305 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 FAM76AQ8TAV0 307 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 TBCKQ8TEA7 893 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 OSBPL9Q96SU4 736 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 LZTS2Q9BRK4 669 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 C6orf50Q9HD87 102 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 EHD2Q9NZN4 543 aa14.71□□□□□ -0.06
SLC28A1-201ENST00000286749 GOLGA6CA6NDK9 693 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 LRRC53A6NM62 1247 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 GOLGA6DP0CG33 693 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 SLC7A5Q01650 507 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 COBLL1Q53SF7 1204 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 SV2BQ7L1I2 683 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 RRAGAQ7L523 313 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 SLC51AQ86UW1 340 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 IQCDQ96DY2 449 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 CDCA7Q9BWT1 371 aaPredicted RBP14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 SPZ1Q9BXG8 430 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 VAT1LQ9HCJ6 419 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 GOLGA6AQ9NYA3 693 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 MYMKA6NI61 221 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 NCK2O43639 380 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 GRB10Q13322 594 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 GRIK5Q16478 980 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 USP17L2Q6R6M4 530 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 DYMQ7RTS9 669 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 ZNF572Q7Z3I7 529 aaPredicted RBP14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 MAPKAPK5Q8IW41 473 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 ANKRD13CQ8N6S4 541 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 BLOC1S4Q9NUP1 217 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 TMEM260Q9NX78 707 aa14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 BIN2Q9UBW5 565 aaPredicted RBP14.7□□□□□ -0.06
SLC28A1-201ENST00000286749 GNA11P29992 359 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 MAN2A1Q16706 1144 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 SOGA3Q5TF21 947 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 ALS2CR12Q96Q35 445 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 HYOU1Q9Y4L1 999 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 LCA5LO95447 670 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 PRLRP16471 622 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 NT5C2P49902 561 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 ITIH3Q06033 890 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 CCDC181Q5TID7 509 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 NBPF5PQ86XG9 351 aaPredicted RBP14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 SALL4Q9UJQ4 1053 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 IRS2Q9Y4H2 1338 aa14.69□□□□□ -0.06
SLC28A1-201ENST00000286749 SHOX2O60902 331 aaPredicted RBP14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 TCP1P17987 556 aaKnown RBP14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 MAGEA1P43355 309 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 MAGEA9P43362 315 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 CORO7P57737 925 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 UNC13DQ70J99 1090 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 REXO1Q8N1G1 1221 aaKnown RBP14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 PNMA5Q96PV4 448 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 PIGSQ96S52 555 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 SEC63Q9UGP8 760 aaKnown RBP14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 SNED1Q8TER0 1413 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 DDX60LQ5H9U9 1706 aaKnown RBP14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 BAG3O95817 575 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 CCDC84Q86UT8 332 aaPredicted RBP14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 BAP1Q92560 729 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 EYA3Q99504 573 aa14.68□□□□□ -0.06
SLC28A1-201ENST00000286749 SRP68Q9UHB9 627 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms