RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 SCLYQ96I15 445 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 GAS2L1Q99501 681 aaPredicted RBP14.92□□□□□ -0.02
CD44-203ENST00000278386 UBAC1Q9BSL1 405 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 MTG1Q9BT17 334 aaPredicted RBP14.92□□□□□ -0.02
CD44-203ENST00000278386 KRT23Q9C075 422 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 TRMT13Q9NUP7 481 aaKnown RBP14.92□□□□□ -0.02
CD44-203ENST00000278386 MSRAQ9UJ68 235 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 TRIP12Q14669 1992 aaPredicted RBP14.92□□□□□ -0.02
CD44-203ENST00000278386 ZBBXA8MT70 800 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 PARP1P09874 1014 aaKnown RBP14.91□□□□□ -0.02
CD44-203ENST00000278386 EDNRBP24530 442 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 CHMP4BP1P59074 171 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 TTLL4Q14679 1199 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 RAB30Q15771 203 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 ADGRF4Q8IZF3 695 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 COPS5Q92905 334 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 CNNM2Q9H8M5 875 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 CXXC1Q9P0U4 656 aaPredicted RBP14.91□□□□□ -0.02
CD44-203ENST00000278386 CTNNA3Q9UI47 895 aa14.91□□□□□ -0.02
CD44-203ENST00000278386 SUPT20HL2P0C7V6 817 aa14.9□□□□□ -0.02
CD44-203ENST00000278386 TXNP10599 105 aaKnown RBP14.9□□□□□ -0.02
CD44-203ENST00000278386 CYP2C9P11712 490 aa14.9□□□□□ -0.02
CD44-203ENST00000278386 QRICH1Q2TAL8 776 aa14.9□□□□□ -0.02
CD44-203ENST00000278386 IFIT1BQ5T764 474 aaKnown RBP14.9□□□□□ -0.02
CD44-203ENST00000278386 RPUSD2Q8IZ73 545 aaKnown RBP14.9□□□□□ -0.02
CD44-203ENST00000278386 PPP1R13LQ8WUF5 828 aa14.9□□□□□ -0.02
CD44-203ENST00000278386 NKX2-4Q9H2Z4 354 aa14.9□□□□□ -0.02
CD44-203ENST00000278386 NBPF20Q3BBV1 942 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 SEPT14Q6ZU15 432 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 DEFB128Q7Z7B8 93 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 FBXO11Q86XK2 927 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 MCF2L2Q86YR7 1114 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 RGS22Q8NE09 1264 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 PRDM12Q9H4Q4 367 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 VAT1LQ9HCJ6 419 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 ZSWIM5Q9P217 1185 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 NOD1Q9Y239 953 aa14.89□□□□□ -0.03
CD44-203ENST00000278386 MRPL11Q9Y3B7 192 aaKnown RBP14.89□□□□□ -0.03
CD44-203ENST00000278386 VCANP13611 3396 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 KPNA6O60684 536 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 ARIH2O95376 493 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 CHST3Q7LGC8 479 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 USP38Q8NB14 1042 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 SYTL5Q8TDW5 730 aaPredicted RBP14.88□□□□□ -0.03
CD44-203ENST00000278386 NSUN6Q8TEA1 469 aaKnown RBP14.88□□□□□ -0.03
CD44-203ENST00000278386 PPM1EQ8WY54 764 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 TBC1D5Q92609 795 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 ANKS1AQ92625 1134 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 TAAR1Q96RJ0 339 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 RMDN3Q96TC7 470 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 IL25Q9H293 177 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 SLC4A7Q9Y6M7 1214 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 BAZ2BQ9UIF8 2168 aaKnown RBP14.88□□□□□ -0.03
CD44-203ENST00000278386 PTPRSQ13332 1948 aa14.88□□□□□ -0.03
CD44-203ENST00000278386 A6NJR5 290 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 CFBP00751 764 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 EIF2AK2P19525 551 aaKnown RBP14.87□□□□□ -0.03
CD44-203ENST00000278386 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 ARHGEF16Q5VV41 709 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 NFRKBQ6P4R8 1299 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 JMJD4Q9H9V9 463 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 SLC28A3Q9HAS3 691 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 COL20A1Q9P218 1284 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 TET1Q8NFU7 2136 aa14.87□□□□□ -0.03
CD44-203ENST00000278386 GH1P01241 217 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 PFKMP08237 780 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 MMP3P08254 477 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 ACTN1P12814 892 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 GSPT1P15170 499 aaKnown RBP14.86□□□□□ -0.03
CD44-203ENST00000278386 RABGGTBP53611 331 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 TRDNQ13061 729 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 STXBP2Q15833 593 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 LY6KQ17RY6 165 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 PPP2R2DQ66LE6 453 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 STAG2Q8N3U4 1231 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 RETREG2Q8NC44 543 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 AFG1LQ8WV93 481 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 AMNQ9BXJ7 453 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 MAF1Q9H063 256 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 YBX2Q9Y2T7 364 aaKnown RBP14.86□□□□□ -0.03
CD44-203ENST00000278386 DOCK5Q9H7D0 1870 aa14.86□□□□□ -0.03
CD44-203ENST00000278386 COL4A4P53420 1690 aaPredicted RBP14.85□□□□□ -0.03
CD44-203ENST00000278386 KLRF2D3W0D1 207 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 ATP2A2P16615 1042 aaKnown RBP14.85□□□□□ -0.03
CD44-203ENST00000278386 IGFBP4P22692 258 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 PDE4AP27815 886 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 RFC2P35250 354 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 PTPN11Q06124 597 aaPredicted RBP14.85□□□□□ -0.03
CD44-203ENST00000278386 ARHGAP1Q07960 439 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 CYB5R4Q7L1T6 521 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 CCDC155Q8N6L0 562 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 IWS1Q96ST2 819 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.03
CD44-203ENST00000278386 PXMP2Q9NR77 195 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 MRVI1Q9Y6F6 885 aa14.85□□□□□ -0.03
CD44-203ENST00000278386 ERICH2A1L162 156 aa14.84□□□□□ -0.03
CD44-203ENST00000278386 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms