RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SNAI1O95863 264 aaPredicted RBP21.05■□□□□ 0.96
SDF4-201ENST00000263741 CCND3P30281 292 aaPredicted RBP21.05■□□□□ 0.96
SDF4-201ENST00000263741 MFSD14CQ5VZR4 134 aa21.05■□□□□ 0.96
SDF4-201ENST00000263741 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.05■□□□□ 0.96
SDF4-201ENST00000263741 ADD3Q9UEY8 706 aaKnown RBP21.05■□□□□ 0.96
SDF4-201ENST00000263741 ZNF467Q7Z7K2 595 aaPredicted RBP21.05■□□□□ 0.96
SDF4-201ENST00000263741 ARMC5Q96C12 935 aa21.05■□□□□ 0.96
SDF4-201ENST00000263741 UNC93B1Q9H1C4 597 aa21.05■□□□□ 0.96
SDF4-201ENST00000263741 PXMP2Q9NR77 195 aa21.05■□□□□ 0.96
SDF4-201ENST00000263741 K7ELQ4 463 aaPredicted RBP21.04■□□□□ 0.96
SDF4-201ENST00000263741 PIK3CDO00329 1044 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 NLRP5P59047 1200 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 ARHGEF16Q5VV41 709 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 MAMDC4Q6UXC1 1216 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 FBXO16Q8IX29 292 aaPredicted RBP21.04■□□□□ 0.96
SDF4-201ENST00000263741 TRMT44Q8IYL2 757 aaKnown RBP21.04■□□□□ 0.96
SDF4-201ENST00000263741 IL27Q8NEV9 243 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 CCDC148Q8NFR7 591 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 LLPHQ9BRT6 129 aaKnown RBP21.04■□□□□ 0.96
SDF4-201ENST00000263741 ZMYND12Q9H0C1 365 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 FOXD4L1Q9NU39 408 aa21.04■□□□□ 0.96
SDF4-201ENST00000263741 ZHX1Q9UKY1 873 aaPredicted RBP21.04■□□□□ 0.96
SDF4-201ENST00000263741 GUCY1B3Q02153 619 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 MAP3K21Q5TCX8 1036 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 JAKMIP3Q5VZ66 844 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 CCDC12Q8WUD4 166 aaPredicted RBP21.03■□□□□ 0.96
SDF4-201ENST00000263741 ABHD8Q96I13 439 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 SYNGAP1Q96PV0 1343 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 ESYT2A0FGR8 921 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 CYBAP13498 195 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 MRPL12P52815 198 aaKnown RBP21.03■□□□□ 0.96
SDF4-201ENST00000263741 ANO1Q5XXA6 986 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 DNERQ8NFT8 737 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 NSUN6Q8TEA1 469 aaKnown RBP21.03■□□□□ 0.96
SDF4-201ENST00000263741 LENG1Q96BZ8 264 aaPredicted RBP21.03■□□□□ 0.96
SDF4-201ENST00000263741 C6orf50Q9HD87 102 aa21.03■□□□□ 0.96
SDF4-201ENST00000263741 CCL5P13501 91 aa21.02■□□□□ 0.96
SDF4-201ENST00000263741 CNGA1P29973 690 aa21.02■□□□□ 0.96
SDF4-201ENST00000263741 NPY5RQ15761 445 aa21.02■□□□□ 0.96
SDF4-201ENST00000263741 HSCBQ8IWL3 235 aa21.02■□□□□ 0.96
SDF4-201ENST00000263741 PDCD2LQ9BRP1 358 aa21.02■□□□□ 0.96
SDF4-201ENST00000263741 SH3GLB2Q9NR46 395 aa21.02■□□□□ 0.96
SDF4-201ENST00000263741 ASB14A6NK59 587 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 MYCLP12524 364 aaPredicted RBP21.01■□□□□ 0.95
SDF4-201ENST00000263741 PTGS1P23219 599 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 PDE4DQ08499 809 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 REXO1Q8N1G1 1221 aaKnown RBP21.01■□□□□ 0.95
SDF4-201ENST00000263741 SNX21Q969T3 373 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 KATNBL1Q9H079 304 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 MAP3K20Q9NYL2 800 aaKnown RBP21.01■□□□□ 0.95
SDF4-201ENST00000263741 PCDHA6Q9UN73 950 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 PCDHA8Q9Y5H6 950 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 SPDYE3A6NKU9 549 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 EDNRBP24530 442 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 PGM5Q15124 567 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 WASF1Q92558 559 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 CNPY2Q9Y2B0 182 aa21.01■□□□□ 0.95
SDF4-201ENST00000263741 ZNF865P0CJ78 1059 aaPredicted RBP21■□□□□ 0.95
SDF4-201ENST00000263741 CLK2P49760 499 aaKnown RBP21■□□□□ 0.95
SDF4-201ENST00000263741 CUL4AQ13619 759 aa21■□□□□ 0.95
SDF4-201ENST00000263741 MSL3Q8N5Y2 521 aaKnown RBP21■□□□□ 0.95
SDF4-201ENST00000263741 FAM184AQ8NB25 1140 aa21■□□□□ 0.95
SDF4-201ENST00000263741 OXER1Q8TDS5 423 aa21■□□□□ 0.95
SDF4-201ENST00000263741 PHF20Q9BVI0 1012 aa21■□□□□ 0.95
SDF4-201ENST00000263741 ANO3Q9BYT9 981 aa21■□□□□ 0.95
SDF4-201ENST00000263741 XRN2Q9H0D6 950 aaKnown RBP eCLIP21■□□□□ 0.953e-7■■■■□ 22.6
SDF4-201ENST00000263741 RNF208Q9H0X6 261 aa21■□□□□ 0.95
SDF4-201ENST00000263741 PDGFCQ9NRA1 345 aa21■□□□□ 0.95
SDF4-201ENST00000263741 RPTORQ8N122 1335 aa21■□□□□ 0.95
SDF4-201ENST00000263741 ADCY6O43306 1168 aa21■□□□□ 0.95
SDF4-201ENST00000263741 NR3C2P08235 984 aa21■□□□□ 0.95
SDF4-201ENST00000263741 GJB2P29033 226 aa21■□□□□ 0.95
SDF4-201ENST00000263741 HMGN5P82970 282 aaKnown RBP21■□□□□ 0.95
SDF4-201ENST00000263741 ACVR2BQ13705 512 aa21■□□□□ 0.95
SDF4-201ENST00000263741 FRMPD4Q14CM0 1322 aa21■□□□□ 0.95
SDF4-201ENST00000263741 TMEM63BQ5T3F8 832 aa21■□□□□ 0.95
SDF4-201ENST00000263741 SAMD3Q8N6K7 520 aa21■□□□□ 0.95
SDF4-201ENST00000263741 MORC4Q8TE76 937 aa21■□□□□ 0.95
SDF4-201ENST00000263741 MAF1Q9H063 256 aa21■□□□□ 0.95
SDF4-201ENST00000263741 HMX1Q9NP08 348 aaPredicted RBP21■□□□□ 0.95
SDF4-201ENST00000263741 PCDHA4Q9UN74 947 aa21■□□□□ 0.95
SDF4-201ENST00000263741 GNA11P29992 359 aa20.99■□□□□ 0.95
SDF4-201ENST00000263741 KRT40Q6A162 431 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 BLIDQ8IZY5 108 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 ABHD16BQ9H3Z7 469 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 SMC3Q9UQE7 1217 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.98■□□□□ 0.95
SDF4-201ENST00000263741 XBP1P17861 261 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 ADCYAP1R1P41586 468 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 C8orf76Q96K31 380 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 DEFB118Q96PH6 123 aa20.98■□□□□ 0.95
SDF4-201ENST00000263741 MKI67P46013 3256 aaKnown RBP20.97■□□□□ 0.95
SDF4-201ENST00000263741 MRPS9P82933 396 aaKnown RBP20.97■□□□□ 0.95
SDF4-201ENST00000263741 CCDC144BQ3MJ40 725 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 GJC2Q5T442 439 aaPredicted RBP20.97■□□□□ 0.95
SDF4-201ENST00000263741 RTEL1Q9NZ71 1219 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 NR5A1Q13285 461 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 TRIM29Q14134 588 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 STXBP2Q15833 593 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 TAPT1Q6NXT6 567 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms