RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 AKR1A1P14550 325 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 XBP1P17861 261 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 HOXA13P31271 388 aaPredicted RBP21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 GJA8P48165 433 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 ME3Q16798 604 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 FCHSD1Q86WN1 690 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 MORC4Q8TE76 937 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 U2AF1L4Q8WU68 220 aaKnown RBP21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 GTF3C6Q969F1 213 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 TAAR1Q96RJ0 339 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 C6orf50Q9HD87 102 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 VTA1Q9NP79 307 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 DDX20Q9UHI6 824 aaKnown RBP21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 SMCO2A6NFE2 343 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 GNA11P29992 359 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 ADCY7P51828 1080 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 SOX10P56693 466 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 STXBP2Q15833 593 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 PRAMEF19Q5SWL8 479 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 MCTP2Q6DN12 878 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 FAM177A1Q8N128 213 aaPredicted RBP21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 BICD2Q8TD16 824 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 PURBQ96QR8 312 aaKnown RBP21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 SH3GLB2Q9NR46 395 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 PXMP2Q9NR77 195 aa21.54■■□□□ 1.04
CYSTM1-201ENST00000261811 MYH7BA7E2Y1 1941 aa21.53■■□□□ 1.04
CYSTM1-201ENST00000261811 STK36Q9NRP7 1315 aa21.53■■□□□ 1.04
CYSTM1-201ENST00000261811 SPDYE3A6NKU9 549 aa21.53■■□□□ 1.04
CYSTM1-201ENST00000261811 STXBP3O00186 592 aa21.53■■□□□ 1.04
CYSTM1-201ENST00000261811 RIC8AQ9NPQ8 531 aa21.53■■□□□ 1.04
CYSTM1-201ENST00000261811 ESYT2A0FGR8 921 aa21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 FOSP01100 380 aaPredicted RBP21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 RARBP10826 455 aa21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 EIF2AK2P19525 551 aaKnown RBP21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 PKN1Q16512 942 aa21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 NECAB1Q8N987 351 aa21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 TRPV1Q8NER1 839 aa21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 COL20A1Q9P218 1284 aa21.52■■□□□ 1.03
CYSTM1-201ENST00000261811 ASTN1O14525 1302 aa21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 MEIS2O14770 477 aa21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 ZNF865P0CJ78 1059 aaPredicted RBP21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 EDNRBP24530 442 aa21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 IQSEC1Q6DN90 963 aa21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 USP17L6PQ6QN14 398 aa21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 ANKLE1Q8NAG6 615 aa21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 SPC25Q9HBM1 224 aa21.51■■□□□ 1.03
CYSTM1-201ENST00000261811 POTEFA5A3E0 1075 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 PPFIA3O75145 1194 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 EIF3JO75822 258 aaKnown RBP21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 STAM2O75886 525 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 NR3C2P08235 984 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 CCND2P30279 289 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 CCDC144BQ3MJ40 725 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 EEPD1Q7L9B9 569 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 ARRDC4Q8NCT1 418 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 LLPHQ9BRT6 129 aaKnown RBP21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 ZMYND12Q9H0C1 365 aa21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 ORC3Q9UBD5 711 aaPredicted RBP21.5■■□□□ 1.03
CYSTM1-201ENST00000261811 LARGE1O95461 756 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 MYCLP12524 364 aaPredicted RBP21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 NLRP5P59047 1200 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 TNFAIP2Q03169 654 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 AP3B2Q13367 1082 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 PGM5Q15124 567 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 XRRA1Q6P2D8 792 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 SCFD2Q8WU76 684 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 PDCD2LQ9BRP1 358 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 CRISPLD2Q9H0B8 497 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 OGDHLQ9ULD0 1010 aa21.49■■□□□ 1.03
CYSTM1-201ENST00000261811 DUSP11O75319 330 aaKnown RBP21.48■■□□□ 1.03
CYSTM1-201ENST00000261811 EN2P19622 333 aaPredicted RBP21.48■■□□□ 1.03
CYSTM1-201ENST00000261811 LHX8Q68G74 356 aa21.48■■□□□ 1.03
CYSTM1-201ENST00000261811 GALNT17Q6IS24 598 aa21.48■■□□□ 1.03
CYSTM1-201ENST00000261811 KCNV1Q6PIU1 500 aa21.48■■□□□ 1.03
CYSTM1-201ENST00000261811 CCDC83Q8IWF9 413 aa21.48■■□□□ 1.03
CYSTM1-201ENST00000261811 FBXO16Q8IX29 292 aaPredicted RBP21.48■■□□□ 1.03
CYSTM1-201ENST00000261811 TRIM29Q14134 588 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 TTLL4Q14679 1199 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 UBE2SQ16763 222 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 GNPTABQ3T906 1256 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 TYW1BQ6NUM6 668 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 RNF180Q86T96 592 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 VSIG10LQ86VR7 867 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 REXO1Q8N1G1 1221 aaKnown RBP21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 KATNBL1Q9H079 304 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 XPNPEP3Q9NQH7 507 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 VPS54Q9P1Q0 977 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 PCDHA6Q9UN73 950 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 PCDHA8Q9Y5H6 950 aa21.47■■□□□ 1.03
CYSTM1-201ENST00000261811 NKRFO15226 690 aaKnown RBP eCLIP21.46■■□□□ 1.03
CYSTM1-201ENST00000261811 HMGN5P82970 282 aaKnown RBP21.46■■□□□ 1.03
CYSTM1-201ENST00000261811 TAPT1Q6NXT6 567 aa21.46■■□□□ 1.03
CYSTM1-201ENST00000261811 NSUN7Q8NE18 718 aaKnown RBP21.46■■□□□ 1.03
CYSTM1-201ENST00000261811 WDR11Q9BZH6 1224 aa21.46■■□□□ 1.03
CYSTM1-201ENST00000261811 AP5M1Q9H0R1 490 aa21.46■■□□□ 1.03
CYSTM1-201ENST00000261811 KIF3AQ9Y496 699 aa21.46■■□□□ 1.03
CYSTM1-201ENST00000261811 FRMPD4Q14CM0 1322 aa21.45■■□□□ 1.03
CYSTM1-201ENST00000261811 RBM47A0AV96 593 aaKnown RBP21.45■■□□□ 1.02
CYSTM1-201ENST00000261811 KBTBD13C9JR72 458 aa21.45■■□□□ 1.02
CYSTM1-201ENST00000261811 CTDNEP1O95476 244 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms