RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 FAM153CQ494X1 144 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 ANKRD40Q6AI12 368 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 DAAM2Q86T65 1068 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 ZCRB1Q8TBF4 217 aaKnown RBP10.21□□□□□ -0.78
SRSF6-201ENST00000244020 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.78
SRSF6-201ENST00000244020 NLRC4Q9NPP4 1024 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 FAM153AQ9UHL3 310 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 CYP2D7A0A087X1C5 515 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 HMGB1P1B2RPK0 211 aaPredicted RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 FTCDO95954 541 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 CSF1RP07333 972 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 CCNE1P24864 410 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 RCAN1P53805 252 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 TNNC1P63316 161 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 GFPT1Q06210 699 aaPredicted RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 SPATA24Q86W54 205 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 RPUSD2Q8IZ73 545 aaKnown RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 MORC4Q8TE76 937 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 CAVIN3Q969G5 261 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 SELENOSQ9BQE4 189 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 STARD3NLO95772 234 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 CTNNA1P35221 906 aaKnown RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 BCAMP50895 628 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 SMTNP53814 917 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 AMPD3Q01432 767 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 EHHADHQ08426 723 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 SLC4A8Q2Y0W8 1093 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 ZNF662Q6ZS27 426 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 CCDC84Q86UT8 332 aaPredicted RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 CCDC50Q8IVM0 306 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 SLC40A1Q9NP59 571 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 BAZ2BQ9UIF8 2168 aaKnown RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 NWD2Q9ULI1 1742 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 FAM107AO95990 144 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 PRLRP16471 622 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 ARL6IP4Q66PJ3 421 aaKnown RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 ZNF512BQ96KM6 892 aaPredicted RBP10.2□□□□□ -0.78
SRSF6-201ENST00000244020 VCPKMTQ9H867 229 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 SLC39A2Q9NP94 309 aa10.2□□□□□ -0.78
SRSF6-201ENST00000244020 ZNF233A6NK53 670 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 BACH1O14867 736 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
SRSF6-201ENST00000244020 SCP2P22307 547 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 CACNA2D3Q8IZS8 1091 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 BLIDQ8IZY5 108 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 ANKS4BQ8N8V4 417 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 GPKOWQ92917 476 aaPredicted RBP eCLIP10.19□□□□□ -0.783e-8■■□□□ 11.5
SRSF6-201ENST00000244020 LRRC53A6NM62 1247 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 ITIH3Q06033 890 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 DBN1Q16643 649 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 HOMEZQ8IX15 550 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 PARP9Q8IXQ6 854 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 ARHGAP20Q9P2F6 1191 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 SWAP70Q9UH65 585 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 C4AP0C0L4 1744 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 C4BP0C0L5 1744 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 GMNCA6NCL1 334 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 TSPY2A6NKD2 308 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 ZNF263O14978 683 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 DDR1Q08345 913 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 IL17AQ16552 155 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 FAM47AQ5JRC9 791 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 TTI2Q6NXR4 508 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 PROSER2Q86WR7 435 aaPredicted RBP10.19□□□□□ -0.78
SRSF6-201ENST00000244020 WHAMMQ8TF30 809 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 MTA3Q9BTC8 594 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 NDST4Q9H3R1 872 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 ACTR5Q9H9F9 607 aaPredicted RBP10.19□□□□□ -0.78
SRSF6-201ENST00000244020 KCNB1Q14721 858 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 INF2Q27J81 1249 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 SLC9C1Q4G0N8 1177 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 RUFY4Q6ZNE9 571 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 TMTC3Q6ZXV5 915 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 TMC4Q7Z404 712 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 CABP7Q86V35 215 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 GIMAP8Q8ND71 665 aaPredicted RBP10.19□□□□□ -0.78
SRSF6-201ENST00000244020 DDX17Q92841 729 aaKnown RBP10.19□□□□□ -0.78
SRSF6-201ENST00000244020 CYFIP2Q96F07 1278 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 TMOD3Q9NYL9 352 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 PACSIN2Q9UNF0 486 aaPredicted RBP10.19□□□□□ -0.78
SRSF6-201ENST00000244020 PLAGL2Q9UPG8 496 aa10.19□□□□□ -0.78
SRSF6-201ENST00000244020 SPEF2Q9C093 1822 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 FNTAP49354 379 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 PTPROQ16827 1216 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 GKAP1Q5VSY0 366 aaPredicted RBP10.18□□□□□ -0.78
SRSF6-201ENST00000244020 CNNM4Q6P4Q7 775 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 HEATR3Q7Z4Q2 680 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 LMNTD2Q8IXW0 634 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 LRRC45Q96CN5 670 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 RNF14Q9UBS8 474 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 USH1CQ9Y6N9 552 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 PFDN1O60925 122 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 PALMO75781 387 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 RHOBTB3O94955 611 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 FCER1AP12319 257 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 LACTBP83111 547 aaPredicted RBP10.18□□□□□ -0.78
SRSF6-201ENST00000244020 STK4Q13043 487 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 VWA3BQ502W6 1294 aa10.18□□□□□ -0.78
SRSF6-201ENST00000244020 DNAJC10Q8IXB1 793 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms