RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 PNMA1Q8ND90 353 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 TNKSO95271 1327 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 NID2Q14112 1375 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 NFIBO00712 420 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 GADD45BO75293 160 aaPredicted RBP19.99■□□□□ 0.79
HOXC6-201ENST00000243108 FDPSP14324 419 aaKnown RBP19.99■□□□□ 0.79
HOXC6-201ENST00000243108 NCLP19338 710 aaKnown RBP19.99■□□□□ 0.79
HOXC6-201ENST00000243108 RTP1P59025 263 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 ZNF445P59923 1031 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 CCDC144BQ3MJ40 725 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 TMEM67Q5HYA8 995 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 FERMT3Q86UX7 667 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 UBA5Q9GZZ9 404 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 ABHD16BQ9H3Z7 469 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 ZSCAN16Q9H4T2 348 aaPredicted RBP19.99■□□□□ 0.79
HOXC6-201ENST00000243108 SYNRGQ9UMZ2 1314 aa19.99■□□□□ 0.79
HOXC6-201ENST00000243108 MYADML2A6NDP7 307 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 H3BQV1 296 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 LTBP2Q14767 1821 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 SNX17Q15036 470 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 CLEC4DQ8WXI8 215 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 FAM184BQ9ULE4 1060 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 PHF24Q9UPV7 400 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 MYH15Q9Y2K3 1946 aa19.98■□□□□ 0.79
HOXC6-201ENST00000243108 MYH6P13533 1939 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 PTGS1P23219 599 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 NT5C2P49902 561 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 UBE2HP62256 183 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 KRT85P78386 507 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 SEC23AQ15436 765 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 ZSCAN23Q3MJ62 389 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 NSMFQ6X4W1 530 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 RGS22Q8NE09 1264 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 SENP2Q9HC62 589 aa19.97■□□□□ 0.79
HOXC6-201ENST00000243108 ELP1O95163 1332 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 IFIT3O14879 490 aaKnown RBP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 FIBPO43427 364 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 BMP8BP34820 402 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 CCSAPQ6IQ19 270 aaPredicted RBP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 KLHDC9Q8NEP7 349 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 KAT14Q9H8E8 782 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 TMEM63CQ9P1W3 806 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 ATP11BQ9Y2G3 1177 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 DUSP11O75319 330 aaKnown RBP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 METAP2P50579 478 aaKnown RBP eCLIP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 BAATQ14032 418 aaPredicted RBP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 SART3Q15020 963 aaKnown RBP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 TRIM60Q495X7 471 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 GPATCH4Q5T3I0 446 aaKnown RBP19.96■□□□□ 0.79
HOXC6-201ENST00000243108 RNF180Q86T96 592 aa19.96■□□□□ 0.79
HOXC6-201ENST00000243108 SOX1O00570 391 aaPredicted RBP19.95■□□□□ 0.78
HOXC6-201ENST00000243108 CTAGE5O15320 804 aa19.95■□□□□ 0.78
HOXC6-201ENST00000243108 ZBTB43O43298 467 aa19.95■□□□□ 0.78
HOXC6-201ENST00000243108 MDM2Q00987 491 aaPredicted RBP19.95■□□□□ 0.78
HOXC6-201ENST00000243108 CCDC178Q5BJE1 867 aa19.95■□□□□ 0.78
HOXC6-201ENST00000243108 TMEM63BQ5T3F8 832 aa19.95■□□□□ 0.78
HOXC6-201ENST00000243108 GAS2L3Q86XJ1 694 aa19.95■□□□□ 0.78
HOXC6-201ENST00000243108 A0A1W2PQ45 241 aaPredicted RBP19.94■□□□□ 0.78
HOXC6-201ENST00000243108 A0A1W2PQY0 241 aa19.94■□□□□ 0.78
HOXC6-201ENST00000243108 CPLX1O14810 134 aa19.94■□□□□ 0.78
HOXC6-201ENST00000243108 RCAN1P53805 252 aa19.94■□□□□ 0.78
HOXC6-201ENST00000243108 SLC30A10Q6XR72 485 aa19.94■□□□□ 0.78
HOXC6-201ENST00000243108 TMTC2Q8N394 836 aa19.94■□□□□ 0.78
HOXC6-201ENST00000243108 PDGFCQ9NRA1 345 aa19.94■□□□□ 0.78
HOXC6-201ENST00000243108 A0A1W2PPC1 479 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 ASB14A6NK59 587 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 CDKL5O76039 1030 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 MRE11P49959 708 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 ACLYP53396 1101 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 FAM173BQ6P4H8 233 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 NFXL1Q6ZNB6 911 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 RAB11FIP4Q86YS3 637 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 ADGRF4Q8IZF3 695 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 STAG2Q8N3U4 1231 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 UBAC1Q9BSL1 405 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 SCAND2PQ9GZW5 306 aaPredicted RBP19.93■□□□□ 0.78
HOXC6-201ENST00000243108 ORC3Q9UBD5 711 aaPredicted RBP19.93■□□□□ 0.78
HOXC6-201ENST00000243108 CCDC69A6NI79 296 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 WTAPQ15007 396 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 KCNA10Q16322 511 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 C1orf53Q5VUE5 145 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 TAPT1Q6NXT6 567 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 EEPD1Q7L9B9 569 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 SH3RF1Q7Z6J0 888 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 MORC4Q8TE76 937 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
HOXC6-201ENST00000243108 UPF3AQ9H1J1 476 aaKnown RBP19.93■□□□□ 0.78
HOXC6-201ENST00000243108 FAM217BQ9NTX9 383 aaPredicted RBP19.93■□□□□ 0.78
HOXC6-201ENST00000243108 SLC12A7Q9Y666 1083 aa19.93■□□□□ 0.78
HOXC6-201ENST00000243108 GOLGA8AA7E2F4 631 aa19.92■□□□□ 0.78
HOXC6-201ENST00000243108 CDC27P30260 824 aa19.92■□□□□ 0.78
HOXC6-201ENST00000243108 ADD1P35611 737 aaKnown RBP19.92■□□□□ 0.78
HOXC6-201ENST00000243108 GJA9P57773 515 aa19.92■□□□□ 0.78
HOXC6-201ENST00000243108 NTRK3Q16288 839 aa19.92■□□□□ 0.78
HOXC6-201ENST00000243108 CDC37Q16543 378 aaPredicted RBP19.92■□□□□ 0.78
HOXC6-201ENST00000243108 USH1GQ495M9 461 aa19.92■□□□□ 0.78
HOXC6-201ENST00000243108 IFIT1BQ5T764 474 aaKnown RBP19.92■□□□□ 0.78
HOXC6-201ENST00000243108 CPLX2Q6PUV4 134 aaKnown RBP19.92■□□□□ 0.78
HOXC6-201ENST00000243108 MICU3Q86XE3 530 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms