RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 KRT2P35908 639 aa23.11■■□□□ 1.29
RHBDD3-201ENST00000216085 ALDH5A1P51649 535 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-201ENST00000216085 FBXO18Q8NFZ0 1043 aa23.11■■□□□ 1.29
RHBDD3-201ENST00000216085 NPLOC4Q8TAT6 608 aa23.11■■□□□ 1.29
RHBDD3-201ENST00000216085 PLXNA1Q9UIW2 1896 aa23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 MMP1P03956 469 aa23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 GNL2Q13823 731 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 MFSD14CQ5VZR4 134 aa23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 LARP1BQ659C4 914 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 FBXO46Q6PJ61 603 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 TAAR1Q96RJ0 339 aa23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 IWS1Q96ST2 819 aa23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 COL20A1Q9P218 1284 aa23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 BIN2Q9UBW5 565 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 PTCH2Q9Y6C5 1203 aa23.1■■□□□ 1.29
RHBDD3-201ENST00000216085 SOWAHBA6NEL2 793 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 TINF2Q9BSI4 451 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 PXMP2Q9NR77 195 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 SYNGAP1Q96PV0 1343 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 HMGCRP04035 888 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 PDIA4P13667 645 aaKnown RBP23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 GRK4P32298 578 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 CLK2P49760 499 aaKnown RBP23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 PDE4DQ08499 809 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 JAKMIP3Q5VZ66 844 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 SHISA4Q96DD7 197 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 GJB4Q9NTQ9 266 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 PCDHA6Q9UN73 950 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 PCDHA8Q9Y5H6 950 aa23.09■■□□□ 1.29
RHBDD3-201ENST00000216085 EIF2AK2P19525 551 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-201ENST00000216085 MAMDC4Q6UXC1 1216 aa23.08■■□□□ 1.29
RHBDD3-201ENST00000216085 KRT25Q7Z3Z0 450 aa23.08■■□□□ 1.29
RHBDD3-201ENST00000216085 PURBQ96QR8 312 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-201ENST00000216085 ANO3Q9BYT9 981 aa23.08■■□□□ 1.29
RHBDD3-201ENST00000216085 CNPY2Q9Y2B0 182 aa23.08■■□□□ 1.29
RHBDD3-201ENST00000216085 CCDC194A0A1B0GVG4 234 aa23.07■■□□□ 1.28
RHBDD3-201ENST00000216085 GUCY1B3Q02153 619 aa23.07■■□□□ 1.28
RHBDD3-201ENST00000216085 SLC9C1Q4G0N8 1177 aa23.07■■□□□ 1.28
RHBDD3-201ENST00000216085 ARMCX2Q7L311 632 aa23.07■■□□□ 1.28
RHBDD3-201ENST00000216085 DIS3L2Q8IYB7 885 aaKnown RBP23.07■■□□□ 1.28
RHBDD3-201ENST00000216085 TRIB2Q92519 343 aa23.07■■□□□ 1.28
RHBDD3-201ENST00000216085 FRMPD4Q14CM0 1322 aa23.07■■□□□ 1.28
RHBDD3-201ENST00000216085 CCND2P30279 289 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 CCL14Q16627 93 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 XRRA1Q6P2D8 792 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 FGD4Q96M96 766 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 TSHZ2Q9NRE2 1034 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 TMEM260Q9NX78 707 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 ELNP15502 786 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 PGM5Q15124 567 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 STXBP2Q15833 593 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 RASGRP4Q8TDF6 673 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 PDCD2LQ9BRP1 358 aa23.06■■□□□ 1.28
RHBDD3-201ENST00000216085 RPTORQ8N122 1335 aa23.05■■□□□ 1.28
RHBDD3-201ENST00000216085 LCTP09848 1927 aa23.05■■□□□ 1.28
RHBDD3-201ENST00000216085 NR3C2P08235 984 aa23.05■■□□□ 1.28
RHBDD3-201ENST00000216085 UBXN2AP68543 259 aa23.05■■□□□ 1.28
RHBDD3-201ENST00000216085 NPY5RQ15761 445 aa23.05■■□□□ 1.28
RHBDD3-201ENST00000216085 FLRT1Q9NZU1 646 aa23.05■■□□□ 1.28
RHBDD3-201ENST00000216085 NRBP1Q9UHY1 535 aa23.05■■□□□ 1.28
RHBDD3-201ENST00000216085 ASTN1O14525 1302 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 STAM2O75886 525 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 EDNRBP24530 442 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 NONOQ15233 471 aaKnown RBP eCLIP23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 MORC4Q8TE76 937 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 FOXP1Q9H334 677 aaPredicted RBP23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 ABHD16BQ9H3Z7 469 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 VPS37CA5D8V6 355 aaPredicted RBP23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 MYCLP12524 364 aaPredicted RBP23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 CYP2C19P33261 490 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 SREBF1P36956 1147 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 PCNX4Q63HM2 1172 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 MCTP1Q6DN14 999 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 PGBD1Q96JS3 809 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 VTA1Q9NP79 307 aa23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 RBM19Q9Y4C8 960 aaKnown RBP23.04■■□□□ 1.28
RHBDD3-201ENST00000216085 M0R2N6 131 aa23.03■■□□□ 1.28
RHBDD3-201ENST00000216085 EIF3JO75822 258 aaKnown RBP23.03■■□□□ 1.28
RHBDD3-201ENST00000216085 BTBD18B2RXH4 712 aa23.02■■□□□ 1.28
RHBDD3-201ENST00000216085 ARHGAP4P98171 946 aa23.02■■□□□ 1.28
RHBDD3-201ENST00000216085 GNPTABQ3T906 1256 aa23.02■■□□□ 1.28
RHBDD3-201ENST00000216085 OXER1Q8TDS5 423 aa23.02■■□□□ 1.28
RHBDD3-201ENST00000216085 INHAP05111 366 aa23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 PRKAR2AP13861 404 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 SYT1P21579 422 aa23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 NR5A1Q13285 461 aa23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 PIK3AP1Q6ZUJ8 805 aa23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 VSIG10LQ86VR7 867 aa23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 ZHX1Q9UKY1 873 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 ZNF76P36508 570 aa23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 SH3TC2Q8TF17 1288 aa23.01■■□□□ 1.27
RHBDD3-201ENST00000216085 STX6O43752 255 aa23■■□□□ 1.27
RHBDD3-201ENST00000216085 SNAI1O95863 264 aaPredicted RBP23■■□□□ 1.27
RHBDD3-201ENST00000216085 ACVR2BQ13705 512 aa23■■□□□ 1.27
RHBDD3-201ENST00000216085 NOSTRINQ8IVI9 506 aa23■■□□□ 1.27
RHBDD3-201ENST00000216085 TBCKQ8TEA7 893 aa23■■□□□ 1.27
RHBDD3-201ENST00000216085 NAP1L4Q99733 375 aaKnown RBP23■■□□□ 1.27
RHBDD3-201ENST00000216085 ADAMTS3O15072 1205 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms