RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 C6orf50Q9HD87 102 aa11.56□□□□□ -0.56
CD9-201ENST00000009180 SH3GLB2Q9NR46 395 aa11.56□□□□□ -0.56
CD9-201ENST00000009180 BIN2Q9UBW5 565 aaPredicted RBP11.56□□□□□ -0.56
CD9-201ENST00000009180 CENPFP49454 3210 aa11.56□□□□□ -0.56
CD9-201ENST00000009180 ESYT2A0FGR8 921 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 PIK3CDO00329 1044 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 CYP2C19P33261 490 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 PRMT2P55345 433 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 IRF5Q13568 498 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 KRT40Q6A162 431 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
CD9-201ENST00000009180 C8orf76Q96K31 380 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 RMDN3Q96TC7 470 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 MCOLN1Q9GZU1 580 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
CD9-201ENST00000009180 DOCK3Q8IZD9 2030 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 LRRC37A2A6NM11 1700 aa11.55□□□□□ -0.56
CD9-201ENST00000009180 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 MYCP01106 439 aaPredicted RBP11.54□□□□□ -0.56
CD9-201ENST00000009180 INHAP05111 366 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 XRCC5P13010 732 aaKnown RBP11.54□□□□□ -0.56
CD9-201ENST00000009180 GRK4P32298 578 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 CLK2P49760 499 aaKnown RBP11.54□□□□□ -0.56
CD9-201ENST00000009180 MRPL12P52815 198 aaKnown RBP11.54□□□□□ -0.56
CD9-201ENST00000009180 NR5A1Q13285 461 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 TRIM29Q14134 588 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 PRAMEF19Q5SWL8 479 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 ARHGEF16Q5VV41 709 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
CD9-201ENST00000009180 ARMCX2Q7L311 632 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 BLIDQ8IZY5 108 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 REXO1Q8N1G1 1221 aaKnown RBP11.54□□□□□ -0.56
CD9-201ENST00000009180 TINF2Q9BSI4 451 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 ANO3Q9BYT9 981 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 PXMP2Q9NR77 195 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 SLC5A4Q9NY91 659 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 PCDHA6Q9UN73 950 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
CD9-201ENST00000009180 PCDHA8Q9Y5H6 950 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 PLXNA1Q9UIW2 1896 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 RPTORQ8N122 1335 aa11.54□□□□□ -0.56
CD9-201ENST00000009180 SNAI1O95863 264 aaPredicted RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 IGHA2P01877 340 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 MMP1P03956 469 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 HMGCRP04035 888 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 HSP90AA1P07900 732 aaKnown RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 XBP1P17861 261 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 SLC9C1Q4G0N8 1177 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 EARS2Q5JPH6 523 aaKnown RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 COL13A1Q5TAT6 717 aaPredicted RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 OLFML2BQ68BL8 750 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 EEPD1Q7L9B9 569 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 DAGLBQ8NCG7 672 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 TRPV1Q8NER1 839 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 NSUN6Q8TEA1 469 aaKnown RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 INTS4Q96HW7 963 aaKnown RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 PDCD2LQ9BRP1 358 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 ADD3Q9UEY8 706 aaKnown RBP11.53□□□□□ -0.56
CD9-201ENST00000009180 FRMPD4Q14CM0 1322 aa11.53□□□□□ -0.56
CD9-201ENST00000009180 ZNFX1Q9P2E3 1918 aaKnown RBP11.52□□□□□ -0.56
CD9-201ENST00000009180 SPDYE3A6NKU9 549 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 BTBD18B2RXH4 712 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 KIF28PB7ZC32 967 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 M0R2N6 131 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 MYCLP12524 364 aaPredicted RBP11.52□□□□□ -0.57
CD9-201ENST00000009180 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
CD9-201ENST00000009180 EDNRBP24530 442 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 GNA11P29992 359 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 KRT2P35908 639 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.57
CD9-201ENST00000009180 PDE4DQ08499 809 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 BECN1Q14457 450 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 PGM5Q15124 567 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 MAMDC4Q6UXC1 1216 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 FBXO16Q8IX29 292 aaPredicted RBP11.52□□□□□ -0.57
CD9-201ENST00000009180 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
CD9-201ENST00000009180 SAMD3Q8N6K7 520 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 DNERQ8NFT8 737 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 FBXO18Q8NFZ0 1043 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 BICD2Q8TD16 824 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 PXYLP1Q8TE99 480 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 GLT8D2Q9H1C3 349 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.57
CD9-201ENST00000009180 ZHX1Q9UKY1 873 aaPredicted RBP11.52□□□□□ -0.57
CD9-201ENST00000009180 KIF3AQ9Y496 699 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 SYNGAP1Q96PV0 1343 aa11.52□□□□□ -0.57
CD9-201ENST00000009180 VPS37CA5D8V6 355 aaPredicted RBP11.51□□□□□ -0.57
CD9-201ENST00000009180 ASB14A6NK59 587 aa11.51□□□□□ -0.57
CD9-201ENST00000009180 NR3C2P08235 984 aa11.51□□□□□ -0.57
CD9-201ENST00000009180 PTGS1P23219 599 aa11.51□□□□□ -0.57
CD9-201ENST00000009180 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
CD9-201ENST00000009180 ANP32AP39687 249 aaKnown RBP11.51□□□□□ -0.57
CD9-201ENST00000009180 MRPS9P82933 396 aaKnown RBP11.51□□□□□ -0.57
CD9-201ENST00000009180 AP3B2Q13367 1082 aa11.51□□□□□ -0.57
CD9-201ENST00000009180 PKN2Q16513 984 aaKnown RBP11.51□□□□□ -0.57
CD9-201ENST00000009180 MFSD14CQ5VZR4 134 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms