RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 SyncQ9EPM5 470 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Angptl3Q9R182 455 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 MypnQ5DTJ9 1315 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 FosP01101 380 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 SrlQ7TQ48 910 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Wdr3Q8BHB4 942 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 4932411N23RikQ8C0S0 470 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 NemfQ8CCP0 1064 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pstpip2Q99M15 334 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Mrps22Q9CXW2 359 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Setd1aE9PYH6 1716 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Gpc4P51655 557 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Map3k7Q62073 579 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pspc1Q8R326 523 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Plekha4Q8VC98 588 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ndc80Q9D0F1 642 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Krt26Q3TRJ4 462 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 FtoQ8BGW1 502 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Stxbp5Q8K400 1152 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Taf1bP97358 586 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Samhd1Q60710 627 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Actn1Q7TPR4 892 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Stx19Q8R1Q0 292 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Prpsap2Q8R574 369 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Fam133bQ9CVI2 245 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ankrd2Q9WV06 328 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Zkscan5Q9Z1D8 819 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 NfkbiaQ9Z1E3 314 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Il7P10168 154 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Arhgap30Q640N3 1101 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Brd2Q7JJ13 798 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Klhl38Q8BSF5 581 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Fbxo3Q9DC63 480 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Trim54Q9ERP3 366 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Rtn3Q9ES97 964 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Twf2Q9Z0P5 349 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Atg4a-psA0A0G2JFS9 396 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Krt24A1L317 512 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Edem3Q2HXL6 931 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Patl1Q3TC46 770 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ulk3Q3U3Q1 472 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Atg4aQ8C9S8 396 aa13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Taco1Q8K0Z7 294 aaKnown RBP13.57□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Vmn1r191Q8K4D0 298 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Taf5lQ91WQ5 589 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Trmt44Q9D2Q2 713 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Npc1l1Q6T3U4 1333 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pdcd2P46718 343 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 S100a5P63084 93 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 NeblQ0II04 452 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Slc12a8Q8VI23 705 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ulk4Q3V129 1303 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 FancaQ9JL70 1439 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Arhgef11Q68FM7 1552 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Kcnk16G5E845 292 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Lmnb2P21619 596 aaKnown RBP13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Adi1Q99JT9 179 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Snx2Q9CWK8 519 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Cyp27a1Q9DBG1 533 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Abca16E9PWJ7 1678 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Mroh8E9PYI4 1049 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 BcrQ6PAJ1 1270 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Slc8a2Q8K596 921 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Lrrc59Q922Q8 307 aaKnown RBP13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Mtmr2Q9Z2D1 643 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pja1O55176 578 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Arpp19P56212 112 aaKnown RBP13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nxf2Q4ZGD8 691 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nr2f2P43135 414 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Arl4aP61213 200 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ireb2Q811J3 963 aaKnown RBP13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pold3Q9EQ28 462 aa13.56□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Gm3248K7N721 186 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Stat5bP42232 786 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Fam160b1Q8CDM8 764 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Krt36B1AQ75 473 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Tcp1P11983 556 aaKnown RBP13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Apol7eQ3UZ24 369 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Islr2Q5RKR3 745 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Anp32cQ64G17 123 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Dcaf5Q80T85 946 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Kbtbd3Q8BHI4 607 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Mfap3Q922T2 349 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Lrrc32G3XA59 663 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Enc1O35709 589 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Slc3a2P10852 526 aaKnown RBP13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Hspd1P63038 573 aaKnown RBP13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Ephb1Q8CBF3 984 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Nek8Q91ZR4 698 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Desi2Q9D291 194 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Gm45015A0A140LII9 184 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Cfap221A9Q751 836 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Gm20425E9Q035 978 aaKnown RBP13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 SrprbP47758 269 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Stx2Q00262 289 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Madcam1Q61826 405 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Sv2cQ69ZS6 727 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Pidd1Q9ERV7 915 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Tnni1Q9WUZ5 187 aa13.55□□□□□ -0.24
Col6a3-208ENSMUST00000188587 Kif6E9PX57 802 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms