RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Cnot6lQ8VEG6 555 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Pkp2Q9CQ73 795 aaKnown RBP9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 PalmdQ9JHU2 551 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Trpm5Q9JJH7 1158 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Arid3bQ9Z1N7 568 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 LctF8VPT3 1931 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 MccE9PWI3 1003 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gcnt4E9Q649 455 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gucy1a2F8VQK3 730 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Mdh1bQ5F204 500 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Cep131Q62036 1060 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Myl10Q62082 202 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Clca4aQ6Q473 924 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ints3Q7TPD0 1041 aaKnown RBP9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Lrrc15Q80X72 579 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Aldh8a1Q8BH00 487 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Defb36Q8K3U4 67 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Rbm19Q8R3C6 952 aaKnown RBP9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Tmc1Q8R4P5 757 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Lrrfip2Q91WK0 415 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 StrbpQ91WM1 672 aaKnown RBP9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Tas1r1Q99PG6 842 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Acox2Q9QXD1 681 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gm45861A0A1B0GRY3 1923 aa9.43□□□□□ -0.9
Trim40-203ENSMUST00000172711 Smchd1Q6P5D8 2007 aaKnown RBP9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Oip5A2AQ14 241 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Acvr2bP27040 536 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 LifrP42703 1092 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 March9Q3TZ87 348 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Prdm1Q60636 856 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Fndc3aQ8BX90 1198 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Trmt13Q8BYH3 481 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Nek11Q8C0Q4 628 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ccdc15Q8C9M2 810 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Pus7lQ8CE46 702 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ca12Q8CI85 354 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Zcchc18Q8VD24 393 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 RestQ8VIG1 1082 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Trpv6Q91WD2 767 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Tmco4Q91WU4 631 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Atg13Q91YI1 516 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Cmtm5Q9D6G9 156 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Limd1Q9QXD8 668 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 JcadQ5DTX6 1320 aa9.42□□□□□ -0.9
Trim40-203ENSMUST00000172711 Prr16A3KMN5 304 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Casp12O08736 419 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Stag2O35638 1231 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Prl7a2O54831 253 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Mx1P09922 631 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 CatspereP0DP43 985 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Aco1P28271 889 aaKnown RBP9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Kifap3P70188 793 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Lrrc55Q3UY51 311 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ccdc27Q3V036 639 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Arhgap1Q5FWK3 439 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Spty2d1Q68FG3 682 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 PigsQ6PD26 555 aaKnown RBP9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Rusc1Q8BG26 893 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Yars2Q8BYL4 472 aaKnown RBP9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Fermt2Q8CIB5 680 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Grin3bQ91ZU9 1003 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Rab30Q923S9 203 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Usp26Q99MX1 835 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 NkapQ9D0F4 415 aaKnown RBP9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ubiad1Q9DC60 336 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 ArcQ9WV31 396 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Col4a4Q9QZR9 1682 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Atad5Q4QY64 1826 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Col12a1Q60847 3120 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Casp8ap2Q9WUF3 1962 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ppfia1B2RXQ2 1266 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Lipo1J3QME6 396 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 StrnO55106 780 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 1700013D24RikQ0P521 120 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Wnt8aQ64527 354 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Rbm34Q8C5L7 375 aaKnown RBP9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gprc5cQ8K3J9 440 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Iqsec1Q8R0S2 961 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Plcd1Q8R3B1 756 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Mtmr14Q8VEL2 648 aa9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Vwa5aQ99KC8 793 aaKnown RBP9.41□□□□□ -0.9
Trim40-203ENSMUST00000172711 Tmem131O70472 1877 aa9.4□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ank3G5E8K5 1961 aa9.4□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gm12800B1AUV4 484 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Gm12794L7MTS5 483 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Sec23aQ01405 765 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Oxr1Q4KMM3 866 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 SkilQ60665 675 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Avpr1aQ62463 423 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Vps72Q62481 368 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 PtprcapQ64697 197 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Crtc1Q68ED7 630 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Tmem151bQ68FE7 561 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Rnf41Q8BH75 317 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Hdhd5Q91WM2 419 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Akirin1Q99LF1 191 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Atp6ap2Q9CYN9 350 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Inpp4aQ9EPW0 939 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Wfdc1Q9ESH5 211 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 Azi2Q9QYP6 405 aa9.4□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms