RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Samhd1Q60710 627 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Crhr2Q60748 411 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Cln3Q61124 438 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ccdc82Q6PG04 518 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Atg4cQ811C2 458 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Plcd1Q8R3B1 756 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ces1Q8VCC2 565 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Npm3Q9CPP0 175 aaKnown RBP15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Hip1rQ9JKY5 1068 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 PolkQ9QUG2 852 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ggps1Q9WTN0 300 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 AdnpQ9Z103 1108 aaKnown RBP15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Cntnap5cQ0V8T7 1305 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Dennd4aE9Q8V6 1869 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ttc6G3UYY4 1857 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Tmem132bF7BAB2 1078 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Lpar1P61793 364 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Fam89aQ14BJ1 175 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ece1Q4PZA2 769 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 A1cfQ5YD48 595 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Slc9a1Q61165 820 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Usp6nlQ80XC3 819 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 NkrfQ8BY02 690 aaKnown RBP15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 PdgfcQ8CI19 345 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Vmn1r203Q8R273 311 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Hs2st1Q8R3H7 356 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Etnk1Q9D4V0 363 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 FibpQ9JI19 357 aa15.74■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Nme9A0A1L1SUL6 329 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Casq1O09165 405 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 SqleP52019 572 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Erbb2P70424 1256 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Tff2Q03404 129 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Rnf207Q3V3A7 635 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Mybpc2Q5XKE0 1136 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Prmt6Q6NZB1 378 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Pramel7Q810Y8 479 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Nipa1Q8BHK1 323 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Appl2Q8K3G9 662 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ero1aQ8R180 464 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 AdpgkQ8VDL4 496 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Smc1bQ920F6 1248 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Xpo5Q924C1 1204 aaKnown RBP15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Rbp7Q9EPC5 134 aa15.73■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Sbno2Q7TNB8 1349 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Olfr67F8VPJ8 320 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Gm10436L7N1Y3 520 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Api5O35841 504 aaKnown RBP15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Timm44O35857 452 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 MarcksP26645 309 aaKnown RBP15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Taf1bP97358 586 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 HmgcrQ01237 887 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Gpatch11Q3UFS4 262 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Lrrc14bQ3UJB3 510 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 4933427I04RikQ3V053 235 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Kcnk18Q6VV64 394 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Nacc1Q7TSZ8 514 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Mcph1Q7TT79 822 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ece2Q80Z60 881 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 F11Q91Y47 624 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 SetQ9EQU5 289 aaKnown RBP15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Dnajb2Q9QYI5 324 aa15.72■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Cyp26c1B2RXA7 518 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 AunipE9Q6Z5 340 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Gja8P28236 440 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Irs1P35569 1233 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Cdc25aP48964 514 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Fdxacb1Q3UY23 622 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Kif5bQ61768 963 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ccdc189Q6NZQ0 333 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ano1Q8BHY3 960 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Dhx32Q8BZS9 744 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Zswim3Q8CFL8 695 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Nxf1Q99JX7 618 aaKnown RBP15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 NaspQ99MD9 773 aaKnown RBP15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Tekt1Q9DAJ2 418 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Msgn1Q9JK54 188 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Lypla2Q9WTL7 231 aa15.71■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Gm7356A0A087WSA6 508 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Dhtkd1A2ATU0 921 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Guca2bO09051 106 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Stra6O70491 670 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 U2af2P26369 475 aaKnown RBP15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Meis1Q60954 390 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Cyp2c29Q64458 490 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Cyp4x1Q6A152 507 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Tmem132dQ76HP3 1097 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Samm50Q8BGH2 469 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Dnai1Q8C0M8 701 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ago4Q8CJF8 861 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Vmn1r191Q8K4D0 298 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Extl2Q9ES89 330 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Lamb2Q61292 1799 aa15.7■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Gucy1a2F8VQK3 730 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Terf2O35144 541 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Tlk2O55047 718 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Slc6a20bO88575 635 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Sox10Q04888 466 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 DSCC1Q14AI0 399 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Samd11Q1RNF8 542 aa15.69■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms