RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Alkbh8Q80Y20 664 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ctdspl2Q8BG15 465 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Krt17Q9QWL7 433 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Clul1Q3ZRW6 464 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gngt2Q61017 69 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Col15a1O35206 1367 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cd72P21855 354 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Vmn1r214Q8R279 367 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Golga1Q9CW79 758 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tpcn1Q9EQJ0 817 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Sucla2Q9Z2I9 463 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Znf568E9PYI1 671 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Grem2O88273 168 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 NsfP46460 744 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gps1Q99LD4 471 aaKnown RBP20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cyp2s1Q9DBX6 501 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Krt71Q9R0H5 524 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Frat1P70339 274 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Rassf2Q8BMS9 326 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ccdc28aQ8CEI3 192 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Disp3A3KFU9 1347 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Atp2a3Q64518 1038 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Alppl2P24823 529 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ttll4Q80UG8 1193 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Prpsap1Q9D0M1 356 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Stk10O55098 966 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Calb1P12658 261 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 Otop3Q80UF9 577 aa20.1■□□□□ 0.81
Sort1-203ENSMUST00000135636 3425401B19RikD3Z1D3 1412 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Polr2fP61219 127 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tmtc1Q3UV71 942 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Mxd3Q80US8 206 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Trmt1lA2RSY6 728 aaKnown RBP20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ugt1a5B2RT14 529 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Pkp1P97350 728 aaKnown RBP20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gnl3Q8CI11 538 aaKnown RBP20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Atp1a1Q8VDN2 1023 aaKnown RBP20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Arfgap2Q99K28 520 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Nid2O88322 1403 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Casp14O89094 257 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 C87499Q3UX49 493 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gm2237E9Q501 211 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gm3591K7N6X2 186 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ehd2Q8BH64 543 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Lig4Q8BTF7 911 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Kif2bQ8C0N1 668 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ccdc17Q8CE13 565 aa20.09■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gm5592Q3V0A6 857 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Bend3Q6PAL0 825 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cyfip1Q7TMB8 1253 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tsc1Q9EP53 1161 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Wdr36Q3TAQ9 899 aaKnown RBP20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Trim80Q3V061 624 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tbc1d30Q69ZT9 766 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Serpinb12Q9D7P9 423 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cdr1E9Q0B4 517 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Serpinb8O08800 374 aaKnown RBP20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Soat2O88908 525 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Myo1fP70248 1099 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Pfkfb1P70266 471 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Atp9bP98195 1146 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 Foxred2Q3USW5 665 aa20.08■□□□□ 0.81
Sort1-203ENSMUST00000135636 YwhagP61982 247 aaKnown RBP20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ttc1Q91Z38 292 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Caln1Q9JJG7 219 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 DexiQ9WUQ7 95 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Erich3F6QRE9 1637 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cep170Q6A065 1588 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Spata31E9QAF0 1014 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Hoxc10P31257 342 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Iqcb1Q8BP00 598 aa20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Rrp9Q91WM3 475 aaKnown RBP20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 Stau1Q9Z108 487 aaKnown RBP20.08■□□□□ 0.8
Sort1-203ENSMUST00000135636 PhkbQ7TSH2 1085 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Lrriq4A6H6A4 596 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Tcaf3Q6QR59 914 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Kcns3Q8BQZ8 491 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pspc1Q8R326 523 aaKnown RBP20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Gys2Q8VCB3 704 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Hps5P59438 1126 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ncoa7Q6DFV7 943 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 SybuQ8BHS8 665 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Arhgef26D3YYY8 869 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Sept2P42208 361 aaKnown RBP20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Gm5169Q5M8P2 212 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cyp2c29Q64458 490 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Armcx2Q6A058 784 aaKnown RBP20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ephx4Q6IE26 359 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 TdrkhQ80VL1 560 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Rrbp1Q99PL5 1605 aaKnown RBP20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Erich2E9Q1A6 463 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Slc39a2G3X943 309 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ftsj1Q8CBC7 324 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cxcl11Q9JHH5 100 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Sos2Q02384 1333 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 TnrQ8BYI9 1358 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pknox2Q8BG99 474 aa20.07■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ass1P16460 412 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Alox15P39654 663 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cyp2e1Q05421 493 aa20.06■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms