RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Zmym1Q3TJB1 983 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 LnpkQ7TQ95 425 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Tmtc4Q8BG19 741 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Pstpip2Q99M15 334 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Rnaseh1O70338 285 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Hdac4Q6NZM9 1076 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Msl1Q6PDM1 616 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Adcy2Q80TL1 1090 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Champ1Q8K327 802 aaKnown RBP25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Psmg1Q9JK23 289 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Idh1O88844 414 aaKnown RBP25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Tex9Q9D845 387 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 ErmapQ9JLN5 566 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Pcdha4O88689 947 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 HelbQ6NVF4 1074 aa25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Eif3cQ8R1B4 911 aaKnown RBP25.09■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 AatkQ80YE4 1365 aa25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Pus7B7ZNL8 666 aaKnown RBP25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 IkbkbO88351 757 aa25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Ckap2lQ7TS74 745 aa25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Zbtb40Q6PCS8 1258 aa25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Ripor2Q80U16 1078 aa25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Lmo7E9PYF4 1699 aaKnown RBP25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 Tbc1d1Q60949 1255 aa25.08■■□□□ 1.61
Sh3rf1-201ENSMUST00000034060 MarsQ68FL6 902 aaKnown RBP25.08■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Q8CEZ4 452 aa25.08■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Nxf1Q99JX7 618 aaKnown RBP25.08■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Stk11Q9WTK7 436 aa25.08■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 A0A286YCQ6 122 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 A630010A05RikA9C473 232 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Atf5O70191 283 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 GartQ64737 1010 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ano8Q6PB70 1060 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Mroh8E9PYI4 1049 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 H6pdQ8CFX1 789 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Tada3Q8R0L9 432 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Sdr42e1Q9D665 394 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Pprc1Q6NZN1 1644 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Hace1Q3U0D9 909 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Abcc12Q80WJ6 1366 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Uggt2E9Q4X2 1504 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Cd3dP04235 173 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 OcrlQ6NVF0 900 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Bbs9Q811G0 885 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 F13a1Q8BH61 732 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Tcof1O08784 1320 aaKnown RBP25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Rtl9Q32KG4 1339 aa25.07■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Pex19Q8VCI5 299 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Zmat2Q9CPW7 199 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Lipo1J3QME6 396 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Tlr7P58681 1050 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Syne3Q4FZC9 975 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Prpf31Q8CCF0 499 aaKnown RBP25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Kctd10Q922M3 315 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Cyth3O08967 399 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Trim43aQ3TL54 445 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Dhx37Q6NZL1 1150 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Stkld1Q80YS9 662 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Wdr46Q9Z0H1 622 aaKnown RBP25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Tubgcp3P58854 905 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Pcdhb15Q91Y04 786 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Q9DAQ4 598 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ano3A2AHL1 981 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Pla2g4eQ50L42 875 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ppp1r12bQ8BG95 976 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Kcnv2Q8CFS6 562 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Lsm14bQ8CGC4 385 aaKnown RBP25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Pold4Q9CWP8 107 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Cog1Q9Z160 980 aa25.06■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Kdm5aQ3UXZ9 1690 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Lrch1P62046 709 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gimap9G3X987 291 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Anxa1P10107 346 aaKnown RBP25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Adssl1P28650 457 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gm4340L7N2C4 268 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Map3k12Q60700 888 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Nlrp14Q6B966 993 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Rrp1bQ91YK2 724 aaKnown RBP25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Zfp449Q8CB76 518 aa25.05■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 1700122O11RikJ3QPW6 241 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 CtcfQ61164 736 aaKnown RBP25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Actn1Q7TPR4 892 aaKnown RBP25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gpcpd1Q8C0L9 675 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Arl8aQ8VEH3 186 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 YarsQ91WQ3 528 aaKnown RBP25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Kiaa1107Q80TK0 1369 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 SmtnQ921U8 923 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Vps33aQ9D2N9 598 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ttc13A0A1L1SSC7 844 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Prdm11A2AGX3 565 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gm28042B7ZCM9 1014 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 LdhbP16125 334 aaKnown RBP25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Wfs1P56695 890 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Srek1ip1Q4V9W2 153 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 PapolaQ61183 739 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ccz1Q8C1Y8 480 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Appl2Q8K3G9 662 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Kif9Q9WV04 790 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Syt2P46097 422 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 HarsQ61035 509 aa25.04■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms