RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Mier3Q3UHF3 551 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gm11437Q5QR91 290 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Pdcl2Q78Y63 240 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Anks1bQ8BIZ1 1259 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Mei4Q8BRM6 389 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Dcaf8Q8N7N5 591 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 HlcsQ920N2 722 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Tbx18Q9EPZ6 613 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Pex11aQ9Z211 246 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Mtmr9Q9Z2D0 545 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Mical3Q8CJ19 1993 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gm11549A0A286YD83 63 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Jakmip2D3YXK0 820 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gcom1E9PZ54 550 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gjc1P28229 396 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Aco1P28271 889 aaKnown RBP8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Pdrg1P59048 133 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Hps5P59438 1126 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Atp11aP98197 1187 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Dcaf17Q3TUL7 519 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gxylt1Q3UHH8 404 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 MyzapQ3UIJ9 466 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Kiaa1211Q5PR69 1207 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Osbpl2Q8BX94 484 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Dnm3Q8BZ98 863 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Trim47Q8C0E3 641 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ubxn2aQ99KJ0 258 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ppil2Q9D787 521 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Tjap1Q9DCD5 539 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ly6iQ9WU67 134 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Eif2ak1Q9Z2R9 619 aa8.71□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 AW822073A0A0N4SUK1 652 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Arhgap4B1AUY3 965 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Il13ra2O88786 383 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 En2P09066 324 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Sox5P35710 763 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Traf5P70191 558 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 NfibP97863 570 aaKnown RBP8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Otud5Q3U2S4 566 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Krt14Q61781 484 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Vil1Q62468 827 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Trak2Q6P9N8 913 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 P2ry10Q8BFU7 328 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Taf6lQ8R2K4 616 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Slc12a8Q8VI23 705 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Efhd1Q9D4J1 240 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 AllcQ9JHX6 414 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 C87977A2A958 498 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 4932429P05RikA2ADI4 785 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gm1993A6X8I0 212 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 SlxD3Z347 212 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gm10378F6XQQ1 160 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 NpcdF8VQB8 469 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Nap1l4Q78ZA7 375 aaKnown RBP8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Arl8aQ8VEH3 186 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Tgm5Q9D7I9 724 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Tmod4Q9JLH8 345 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Adamtsl1Q8BLI0 1745 aa8.7□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Map7d1A2AJI0 846 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Krt18P05784 423 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Nap1l1P28656 391 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Akr1b1P45376 316 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Zfp781Q0P5U5 243 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 KhsrpQ3U0V1 748 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Tbc1d30Q69ZT9 766 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Kcnv2Q8CFS6 562 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Brd3Q8K2F0 726 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Matr3Q8K310 846 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Kif17Q99PW8 1038 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 PdhbQ9D051 359 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Styxl1Q9DAR2 321 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Copb1Q9JIF7 953 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Egfl6Q9JJZ5 550 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 SrcapA0A087WQ44 3271 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Fam205a1D3YZF6 1314 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Idh1O88844 414 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Samsn1P57725 372 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Psmd1Q3TXS7 953 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Dpf2Q61103 391 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ptger2Q62053 362 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Usp17leQ7M764 540 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Sdccag8Q80UF4 717 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ccz1Q8C1Y8 480 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Fam161bQ8CB59 589 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ccdc14Q8K2J4 934 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Vps18Q8R307 973 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Snapc2Q91XA5 359 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gmcl1Q920G9 524 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ddx20Q9JJY4 825 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 GsdmeQ9Z2D3 512 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Lrp5Q91VN0 1614 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Ccdc88cQ6VGS5 2009 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gm5580A0A0N4SVP8 411 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gm4307E9PZY4 289 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Usp17ldG5E8G2 545 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Usp17lcG5E8I7 545 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gm4312K9J7E2 289 aa8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 P4hbP09103 509 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Hmgb1P63158 215 aaKnown RBP8.69□□□□□ -1.02
Ccdc39-201ENSMUST00000029222 Gucy2cQ3UWA6 1072 aa8.69□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms