RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 AacsQ9D2R0 672 aa20.44■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Fut8Q9WTS2 575 aa20.44■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Gm1993A6X8I0 212 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 SlxD3Z347 212 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Gcnt1Q09324 428 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Rnf40Q3U319 1001 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Recql4Q75NR7 1216 aaKnown RBP20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 RragaQ80X95 313 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Dennd2aQ8C4S8 1000 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Serpinb12Q9D7P9 423 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Rpf2Q9JJ80 306 aaKnown RBP20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Gm5114W4VSN8 858 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Abcb4P21440 1276 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Akr1b1P45376 316 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Nedd4P46935 887 aaKnown RBP20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Fbln1Q08879 705 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Tmtc1Q3UV71 942 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Olfr805Q8VFI4 319 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Lzts2Q91YU6 671 aa20.43■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Nap1l2P51860 460 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Pdrg1P59048 133 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Vgll3P85442 326 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Kcnma1Q08460 1209 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Fam196bQ6GQV1 535 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Morc2bQ8C5W4 1022 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Amhr2Q8K592 568 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Prpf6Q91YR7 941 aaKnown RBP20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Cmtr1Q9DBC3 837 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Rsbn1lD3Z0K6 821 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Fam178bQ24JP3 464 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Slc2a13Q3UHK1 637 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Ccdc42Q5SV66 316 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Glra4Q61603 456 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Thap3Q8BJ25 218 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Ccdc105Q9D4K7 499 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Zfp646Q6NV66 1788 aa20.42■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Atp8b1Q148W0 1251 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 D130040H23RikQ8BII3 405 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Trmt44Q9D2Q2 713 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Tcp10bE9PYJ0 438 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Pafah1b1P63005 410 aaKnown RBP20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Dpp8Q80YA7 892 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Dclk3Q8BWQ5 790 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Prl7b1Q8CGZ9 251 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Tldc1Q8K0P3 455 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Ces1Q8VCC2 565 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Mtmr4Q91XS1 1190 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Krt34Q9D646 392 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 2310002L09RikQ9D7L5 217 aa20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 AdnpQ9Z103 1108 aaKnown RBP20.41■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Mx1P09922 631 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 PtgdrP70263 357 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Sap30bpQ02614 308 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Lca5Q80ST9 704 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Gpcpd1Q8C0L9 675 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Psma7Q9Z2U0 248 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Sema3fO88632 785 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Setd4P58467 439 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Sdccag8Q80UF4 717 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Rcor2Q8C796 523 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Ubxn6Q99PL6 442 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Akt1s1Q9D1F4 257 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Tacc2Q9JJG0 1149 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Map7d2A2AG50 781 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Hnrnph3D3Z3N4 346 aaKnown RBP20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Copb2O55029 905 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Krt87Q6IMF0 495 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Exoc8Q6PGF7 716 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Camsap3Q80VC9 1252 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Cc2d1bQ8BRN9 848 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Parp10Q8CIE4 960 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 ParnQ8VDG3 624 aa20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Ccnt1Q9QWV9 724 aaKnown RBP20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Fxr2Q9WVR4 673 aaKnown RBP20.4■□□□□ 0.86
Ccdc3-201ENSMUST00000027988 Ltbp1Q8CG19 1712 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Tom1O88746 492 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Hps5P59438 1126 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Stim2P83093 746 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Wdr70Q3TWF6 657 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 AsnsQ61024 561 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Spag7Q7TNE3 227 aaKnown RBP20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Tmem132aQ922P8 1018 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Ipo7Q9EPL8 1038 aaKnown RBP20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 LdhaP06151 332 aaKnown RBP20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Kctd1Q5M956 257 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Foxd1Q61345 456 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Cdk17Q8K0D0 523 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Usp15Q8R5H1 981 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Rab3il1Q8VDV3 383 aa20.39■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Tubb4bP68372 445 aaKnown RBP20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Kifap3P70188 793 aa20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Klhdc9Q3USL1 350 aa20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Lrrfip1Q3UZ39 729 aaKnown RBP20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Ces1eQ64176 562 aa20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Tlr13Q6R5N8 991 aa20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Ccdc172Q810N9 267 aa20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Gtf2iQ9ESZ8 998 aaKnown RBP20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Gdf11Q9Z1W4 405 aa20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Cd44P15379 778 aa20.38■□□□□ 0.85
Ccdc3-201ENSMUST00000027988 Eef2P58252 858 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms