RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Crb1Q8VHS2 1405 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Cdhr2E9Q7P9 1308 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 MeiocA2AG06 965 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gm10378F6XQQ1 160 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Trmt1Q3TX08 663 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Cep70Q6IQY5 616 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Tubb2aQ7TMM9 445 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Cpa1Q7TPZ8 419 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ccdc122Q8BVN0 290 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Slc14a2Q8R4T9 930 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Apopt1Q9CQW7 192 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Tubb2bQ9CWF2 445 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Tob2Q9JM55 345 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Krt71Q9R0H5 524 aa13.23□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Fam186bD3Z420 943 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Psmd14O35593 310 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ncf2O70145 525 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Eef1dP57776 281 aaKnown RBP13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Siah1aP61092 282 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Abl2Q4JIM5 1182 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ccdc38Q8CDN8 563 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Arhgef6Q8K4I3 771 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Klc3Q91W40 508 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Psma8Q9CWH6 250 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Galntl5Q9D4M9 431 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Znf394Q9Z1D9 521 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Slit1Q80TR4 1531 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Tjp1P39447 1745 aaKnown RBP13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 PltpP55065 493 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Opa1P58281 960 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 MagohP61327 146 aaKnown RBP13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Aak1Q3UHJ0 959 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ccdc160Q3UYG1 323 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ckap2Q3V1H1 664 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Mum1l1Q4VA55 681 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Orc2Q60862 576 aaKnown RBP13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ehbp1Q69ZW3 1231 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 B4galnt4Q766D5 1034 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 DlatQ8BMF4 642 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gpcpd1Q8C0L9 675 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Mylk2Q8VCR8 613 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Anapc4Q91W96 807 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 MagohbQ9CQL1 146 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Siglec1Q62230 1695 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gm30191A0A0U1RNT7 187 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Nr1i2O54915 431 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ssrp1Q08943 708 aaKnown RBP13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Plekhf1Q3TB82 279 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Sh3gl2Q62420 352 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ankzf1Q80UU1 748 aaKnown RBP13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Kctd3Q8BFX3 815 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Lrrc45Q8CIM1 670 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Taco1Q8K0Z7 294 aaKnown RBP13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gpr108Q91WD0 569 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Pcdhb3Q91XZ7 784 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Atp6v0a4Q920R6 833 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ccdc182Q9D9C6 152 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Ccdc97Q9DBT3 340 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Stat2Q9WVL2 923 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Clip2Q9Z0H8 1047 aa13.22□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gm5934D3Z4U6 212 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gm4307E9PZY4 289 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gm4312K9J7E2 289 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Pkn1P70268 946 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Cfap53Q9D439 514 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Tktl2Q9D4D4 627 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Myo1hQ9D6A1 958 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Cd274Q9EP73 290 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Gys1Q9Z1E4 738 aaKnown RBP13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Myh13B1AR69 1938 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Frmd7A2AD83 703 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Kcnb1Q03717 857 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Adat2Q6P6J0 191 aa13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 NfrkbQ6PIJ4 1296 aaKnown RBP13.21□□□□□ -0.29
Ercc4-201ENSMUST00000023206 Zfp853A0A1D5RM95 733 aa13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Copb2O55029 905 aa13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Mars2Q499X9 586 aaKnown RBP13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Ift20Q61025 132 aa13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 TwistnbQ78WZ7 330 aaKnown RBP13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Sec24bQ80ZX0 1251 aa13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Arhgap18Q8K0Q5 663 aa13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Nxnl2Q9D531 156 aa13.21□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Col20a1Q923P0 1320 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Tmed8Q3UHI4 326 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Ccdc157Q5SPX1 718 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 NemfQ8CCP0 1064 aaKnown RBP13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Lrrc41Q8K1C9 807 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Lrrc14Q8VC16 493 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 3830403N18RikQ9D6C3 208 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 MefvQ9JJ26 767 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Fbf1A2A870 1173 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Krt78E9Q0F0 1068 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Arhgap6O54834 987 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Map2k1P31938 393 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Dnm2P39054 870 aaKnown RBP13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Pbx1P41778 430 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Zfp781Q0P5U5 243 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Krt12Q64291 487 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Jade3Q6IE82 823 aa13.2□□□□□ -0.3
Ercc4-201ENSMUST00000023206 VmacQ8BP01 174 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms