RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Pspc1Q8R326 523 aaKnown RBP11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ushbp1Q8R370 680 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pcdhgc5Q91XW9 944 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 HgsQ99LI8 775 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Dach1Q9QYB2 751 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Olfr247E9PVJ7 320 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm38392E9Q2A2 434 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Olfr819K7N727 320 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gucy1b3O54865 620 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Acot10Q32MW3 439 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Zbtb38Q3LR78 1197 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 PodnQ7TQ62 611 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Sipa1l1Q8C0T5 1782 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Abca14E9Q8F8 1683 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nek1P51954 1203 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ddx17Q501J6 650 aaKnown RBP11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ppp4r4Q8C0Y0 875 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 E4f1Q8CCE9 783 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cgref1Q8R1U2 281 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ophn1Q99J31 802 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Sem1P60897 70 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Tcp11Q01755 566 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Galnt17Q7TT15 598 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ripor2Q80U16 1078 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Clic6Q8BHB9 596 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 Hps6Q8BLY7 805 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 DpydQ8CHR6 1025 aa11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 AticQ9CWJ9 592 aaKnown RBP11.76□□□□□ -0.53
Ciita-201ENSMUST00000023147 A0A1W2P6Q8 802 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm9048A0A1W2P7H4 802 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 A0A1W2P7Z8 802 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm9046A0A1W2P855 802 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Prdm11A2AGX3 565 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pfdn4Q3UWL8 134 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nlrp14Q6B966 993 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 RragaQ80X95 313 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Hpcal4Q8BGZ1 191 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Iqcb1Q8BP00 598 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nkiras1Q8CEC5 192 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cep57Q8CEE0 500 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nr1i2O54915 431 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cd3dP04235 173 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Casp2P29594 452 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Serpinb1cQ5SV42 375 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 NntQ61941 1086 aaKnown RBP11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Fndc3aQ8BX90 1198 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Trim32Q8CH72 655 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pomgnt1Q91X88 660 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 NonoQ99K48 473 aaKnown RBP11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ska2Q9CR46 120 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Efcc1Q9JJF6 558 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Tmem2Q5FWI3 1383 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Spata18Q0P557 537 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cyp24a1Q64441 514 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 HelbQ6NVF4 1074 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Hdac4Q6NZM9 1076 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Efcab14Q8BGQ6 484 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Caps2Q8BUG5 550 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Lrp2bpQ9D4C6 346 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Rmi1Q9D4G9 616 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Spata17Q9D552 379 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Zfp94E9Q6Y4 486 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ctnna1P26231 906 aaKnown RBP11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Actn4P57780 912 aaKnown RBP11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Lig3P97386 1015 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 ItkQ03526 625 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nhej1Q3KNJ2 295 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Mphosph8Q3TYA6 858 aaKnown RBP11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Agap2Q3UHD9 1186 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Map3k12Q60700 888 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Klhl14Q69ZK5 630 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 PaoxQ8C0L6 504 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Psip1Q99JF8 528 aaKnown RBP11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Zcchc8Q9CYA6 709 aaKnown RBP11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Stk39Q9Z1W9 556 aa11.75□□□□□ -0.53
Ciita-201ENSMUST00000023147 Kcnb2A6H8H5 907 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 ClgnP52194 611 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 MaeaQ4VC33 396 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Mdh1bQ5F204 500 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ccdc125Q5U465 500 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Mtss1lQ6P9S0 715 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 TxlngQ8BHN1 524 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Snip1Q8BIZ6 383 aaKnown RBP11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ppp1r37Q8BKR5 712 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Saal1Q9D2C2 474 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 4931423N10RikQ9D4J9 382 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Bin2D3Z6Q9 489 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Art2aP17981 287 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nr1d1Q3UV55 615 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Rnf168Q80XJ2 565 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Zbtb41Q811F1 908 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Armcx3Q8BHS6 379 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 AbraQ8BUZ1 375 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Vmn1r199Q8R280 367 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cbx8Q9QXV1 362 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Tnfrsf10bQ9QZM4 381 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Stx1bP61264 288 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ccdc160Q3UYG1 323 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ccdc87Q8CDL9 855 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Arhgap18Q8K0Q5 663 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms