RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 TY1A-GR2Q12485 440 aa5.44□□□□□ -1.54
snR49snR49 GCD11P32481 527 aaKnown RBP5.43□□□□□ -1.54
snR49snR49 AIR1P40507 360 aaKnown RBP5.43□□□□□ -1.54
snR49snR49 NPL4P33755 580 aa5.42□□□□□ -1.54
snR49snR49 COX6P00427 148 aa5.4□□□□□ -1.54
snR49snR49 MVP1P40959 511 aaKnown RBP5.4□□□□□ -1.54
snR49snR49 YPL062WQ02781 134 aa5.4□□□□□ -1.54
snR49snR49 LAM6Q08001 693 aa5.4□□□□□ -1.54
snR49snR49 SPT16P32558 1035 aaKnown RBP5.39□□□□□ -1.55
snR49snR49 BRE2P43132 505 aa5.39□□□□□ -1.55
snR49snR49 VPS70P47161 811 aa5.38□□□□□ -1.55
snR49snR49 YPR109WQ06104 294 aa5.38□□□□□ -1.55
snR49snR49 RGR1P19263 1082 aa5.37□□□□□ -1.55
snR49snR49 FRK1Q03002 865 aaPredicted RBP5.37□□□□□ -1.55
snR49snR49 MAK21Q12176 1025 aaKnown RBP5.37□□□□□ -1.55
snR49snR49 GCR2Q01722 534 aa5.36□□□□□ -1.55
snR49snR49 RRN7P40992 514 aa5.35□□□□□ -1.55
snR49snR49 GAR1P28007 205 aaKnown RBP5.34□□□□□ -1.55
snR49snR49 BDP1P46678 594 aa5.34□□□□□ -1.55
snR49snR49 CDC4P07834 779 aa5.33□□□□□ -1.56
snR49snR49 ERF2Q06551 359 aa5.32□□□□□ -1.56
snR49snR49 KEX2P13134 814 aa5.3□□□□□ -1.56
snR49snR49 PAT1P25644 796 aaKnown RBP5.3□□□□□ -1.56
snR49snR49 GBP2P25555 427 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
snR49snR49 MET22P32179 357 aa5.29□□□□□ -1.56
snR49snR49 HED1Q03937 162 aa5.29□□□□□ -1.56
snR49snR49 PAC1P39946 494 aaKnown RBP5.26□□□□□ -1.57
snR49snR49 MOD5P07884 428 aa5.25□□□□□ -1.57
snR49snR49 ENV9Q08651 330 aa5.25□□□□□ -1.57
snR49snR49 AGE1Q04412 482 aa5.24□□□□□ -1.57
snR49snR49 MET32Q12041 191 aa5.23□□□□□ -1.57
snR49snR49 PBS2P08018 668 aa5.22□□□□□ -1.57
snR49snR49 PSE1P32337 1089 aaKnown RBP5.22□□□□□ -1.57
snR49snR49 ASH1P34233 588 aa5.22□□□□□ -1.57
snR49snR49 TUB4P53378 473 aa5.21□□□□□ -1.58
snR49snR49 YDR444WQ04093 687 aa5.21□□□□□ -1.58
snR49snR49 PUS5Q06244 254 aa5.21□□□□□ -1.58
snR49snR49 AFT1P22149 690 aa5.2□□□□□ -1.58
snR49snR49 CKB1P43639 278 aa5.2□□□□□ -1.58
snR49snR49 CLB5P30283 435 aa5.18□□□□□ -1.58
snR49snR49 RTF1P53064 558 aa5.17□□□□□ -1.58
snR49snR49 HST3P53687 447 aa5.17□□□□□ -1.58
snR49snR49 YNL115CP53925 644 aa5.17□□□□□ -1.58
snR49snR49 LCB5Q06147 687 aaKnown RBP5.17□□□□□ -1.58
snR49snR49 SIT4P20604 311 aa5.16□□□□□ -1.58
snR49snR49 YDL176WQ12027 708 aa5.16□□□□□ -1.58
snR49snR49 RRD1P40454 393 aaKnown RBP5.14□□□□□ -1.59
snR49snR49 YJR115WP47152 169 aa5.14□□□□□ -1.59
snR49snR49 MAM3Q12296 706 aa5.14□□□□□ -1.59
snR49snR49 TPD3P31383 635 aa5.12□□□□□ -1.59
snR49snR49 IES2P40154 320 aa5.11□□□□□ -1.59
snR49snR49 TEA1P47988 759 aa5.11□□□□□ -1.59
snR49snR49 KXD1P53158 218 aa5.11□□□□□ -1.59
snR49snR49 NIS1P53939 407 aa5.11□□□□□ -1.59
snR49snR49 DSF2P38213 736 aa5.1□□□□□ -1.59
snR49snR49 HXT10P43581 546 aa5.1□□□□□ -1.59
snR49snR49 NUP42P49686 430 aaKnown RBP5.1□□□□□ -1.59
snR49snR49 PDC1P06169 563 aaKnown RBP5.09□□□□□ -1.59
snR49snR49 SYH1Q02875 849 aaKnown RBP5.08□□□□□ -1.6
snR49snR49 MSB3P48566 633 aaPredicted RBP5.07□□□□□ -1.6
snR49snR49 SLY41P22215 453 aa5.06□□□□□ -1.6
snR49snR49 DIT2P21595 489 aa5.05□□□□□ -1.6
snR49snR49 FPK1P53739 893 aa5.05□□□□□ -1.6
snR49snR49 ACO2P39533 789 aa5.04□□□□□ -1.6
snR49snR49 SAS10Q12136 610 aaPredicted RBP5.04□□□□□ -1.6
snR49snR49 CAF120P53836 1060 aa5.03□□□□□ -1.6
snR49snR49 UGA3P26370 528 aa5.02□□□□□ -1.61
snR49snR49 PTK2P47116 818 aaKnown RBP5.02□□□□□ -1.61
snR49snR49 PUS6P53294 404 aa5.02□□□□□ -1.61
snR49snR49 OPT2Q06593 877 aa5.02□□□□□ -1.61
snR49snR49 RPA14P50106 137 aa5.01□□□□□ -1.61
snR49snR49 YPR097WQ06839 1073 aa5.01□□□□□ -1.61
snR49snR49 SCJ1P25303 377 aa5□□□□□ -1.61
snR49snR49 KIP2P28743 706 aa5□□□□□ -1.61
snR49snR49 YMR196WQ04336 1088 aa5□□□□□ -1.61
snR49snR49 ALR1Q08269 859 aa5□□□□□ -1.61
snR49snR49 YDL206WQ12424 762 aa5□□□□□ -1.61
snR49snR49 SPB4P25808 606 aaPredicted RBP4.99□□□□□ -1.61
snR49snR49 MRT4P33201 236 aaKnown RBP4.99□□□□□ -1.61
snR49snR49 IXR1P33417 597 aa4.99□□□□□ -1.61
snR49snR49 SRF1Q12516 437 aa4.99□□□□□ -1.61
snR49snR49 TBF1Q02457 562 aa4.98□□□□□ -1.61
snR49snR49 YLR346CQ06139 101 aa4.98□□□□□ -1.61
snR49snR49 TRM1P15565 570 aaKnown RBP4.97□□□□□ -1.61
snR49snR49 NUP85P46673 744 aa4.97□□□□□ -1.61
snR49snR49 GLY1P37303 387 aaKnown RBP4.96□□□□□ -1.62
snR49snR49 BUB1P41695 1021 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
snR49snR49 HST2P53686 357 aa4.96□□□□□ -1.62
snR49snR49 TYW1Q08960 810 aaKnown RBP4.95□□□□□ -1.62
snR49snR49 TRK2P28584 889 aa4.94□□□□□ -1.62
snR49snR49 YIR007WP40566 764 aa4.94□□□□□ -1.62
snR49snR49 MMP1Q12372 583 aa4.94□□□□□ -1.62
snR49snR49 DMA1P38823 416 aa4.93□□□□□ -1.62
snR49snR49 RTT106P40161 455 aa4.93□□□□□ -1.62
snR49snR49 SCW11P53189 542 aa4.93□□□□□ -1.62
snR49snR49 MTC5Q03897 1148 aa4.93□□□□□ -1.62
snR49snR49 TY1A-BLQ12266 440 aa4.93□□□□□ -1.62
snR49snR49 MIP1P15801 1254 aa4.92□□□□□ -1.62
snR49snR49 YGR035CP53222 116 aa4.92□□□□□ -1.62
snR49snR49 HPF1Q05164 967 aa4.91□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms