RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C NCR1Q12200 1170 aa7.28□□□□□ -1.24
SPN1YPR133C MYO4P32492 1471 aa7.27□□□□□ -1.25
SPN1YPR133C STS1P38637 319 aa7.26□□□□□ -1.25
SPN1YPR133C SNQ2P32568 1501 aaKnown RBP7.26□□□□□ -1.25
SPN1YPR133C SNT2P53127 1403 aa7.26□□□□□ -1.25
SPN1YPR133C RCR1P38212 213 aa7.22□□□□□ -1.25
SPN1YPR133C PDR12Q02785 1511 aa7.19□□□□□ -1.26
SPN1YPR133C TFG1P41895 735 aaPredicted RBP7.19□□□□□ -1.26
SPN1YPR133C MLP2P40457 1679 aa7.19□□□□□ -1.26
SPN1YPR133C JIP4Q03361 876 aa7.17□□□□□ -1.26
SPN1YPR133C TRM3Q07527 1436 aa7.16□□□□□ -1.26
SPN1YPR133C GDB1Q06625 1536 aa7.16□□□□□ -1.26
SPN1YPR133C CHC1P22137 1653 aaKnown RBP7.14□□□□□ -1.27
SPN1YPR133C MET10P39692 1035 aa7.14□□□□□ -1.27
SPN1YPR133C DAN4P47179 1161 aa7.14□□□□□ -1.27
SPN1YPR133C PDR10P51533 1564 aa7.14□□□□□ -1.27
SPN1YPR133C GYP5Q12344 894 aa7.13□□□□□ -1.27
SPN1YPR133C IQG1Q12280 1495 aa7.12□□□□□ -1.27
SPN1YPR133C HTA1P04911 132 aaKnown RBP7.12□□□□□ -1.27
SPN1YPR133C HTA2P04912 132 aa7.12□□□□□ -1.27
SPN1YPR133C RAM2P29703 316 aa7.12□□□□□ -1.27
SPN1YPR133C YDL129WQ07555 291 aa7.11□□□□□ -1.27
SPN1YPR133C DNF3Q12674 1656 aa7.11□□□□□ -1.27
SPN1YPR133C SAP30P38429 201 aa7.1□□□□□ -1.27
SPN1YPR133C BUD3P25558 1636 aa7.09□□□□□ -1.27
SPN1YPR133C ARO1P08566 1588 aaKnown RBP7.09□□□□□ -1.27
SPN1YPR133C STH1P32597 1359 aa7.08□□□□□ -1.28
SPN1YPR133C PDR15Q04182 1529 aaKnown RBP7.08□□□□□ -1.28
SPN1YPR133C BCK2P33306 851 aa7.07□□□□□ -1.28
SPN1YPR133C MAK11P20484 414 aaKnown RBP7.06□□□□□ -1.28
SPN1YPR133C CHL1P22516 861 aaPredicted RBP7.06□□□□□ -1.28
SPN1YPR133C DCW1P36091 449 aa7.06□□□□□ -1.28
SPN1YPR133C PTC4P38089 393 aa7.06□□□□□ -1.28
SPN1YPR133C YEL023CP39992 682 aa7.06□□□□□ -1.28
SPN1YPR133C YTA7P40340 1379 aa7.06□□□□□ -1.28
SPN1YPR133C NUP157P40064 1391 aaKnown RBP7.04□□□□□ -1.28
SPN1YPR133C PRE3P38624 215 aa7.03□□□□□ -1.28
SPN1YPR133C RTT106P40161 455 aa7.03□□□□□ -1.28
SPN1YPR133C USO1P25386 1790 aa7.02□□□□□ -1.29
SPN1YPR133C SEC7P11075 2009 aaKnown RBP7.01□□□□□ -1.29
SPN1YPR133C GRE2Q12068 342 aaKnown RBP6.98□□□□□ -1.29
SPN1YPR133C COQ8P27697 501 aa6.96□□□□□ -1.3
SPN1YPR133C TY3B-GQ99315 1547 aa6.95□□□□□ -1.3
SPN1YPR133C EDS1P38073 919 aa6.93□□□□□ -1.3
SPN1YPR133C YBT1P32386 1661 aa6.93□□□□□ -1.3
SPN1YPR133C DMA1P38823 416 aa6.91□□□□□ -1.3
SPN1YPR133C ATH1P48016 1211 aa6.91□□□□□ -1.3
SPN1YPR133C PML39Q03760 334 aa6.91□□□□□ -1.3
SPN1YPR133C GUT1P32190 709 aa6.9□□□□□ -1.3
SPN1YPR133C PTC3P34221 468 aaKnown RBP6.9□□□□□ -1.3
SPN1YPR133C NOP53Q12080 455 aaKnown RBP6.9□□□□□ -1.3
SPN1YPR133C SET1P38827 1080 aaKnown RBP6.88□□□□□ -1.31
SPN1YPR133C XDJ1P39102 459 aa6.88□□□□□ -1.31
SPN1YPR133C YAP3P38749 330 aa6.87□□□□□ -1.31
SPN1YPR133C ELP4Q02884 456 aaKnown RBP6.87□□□□□ -1.31
SPN1YPR133C RGA2Q06407 1009 aa6.87□□□□□ -1.31
SPN1YPR133C VRP1P37370 817 aa6.86□□□□□ -1.31
SPN1YPR133C YDR344CQ05510 147 aa6.85□□□□□ -1.31
SPN1YPR133C MAK10Q02197 733 aa6.84□□□□□ -1.31
SPN1YPR133C ARH1P48360 493 aa6.83□□□□□ -1.32
SPN1YPR133C NST1P53935 1240 aa6.83□□□□□ -1.32
SPN1YPR133C CAT8P39113 1433 aa6.83□□□□□ -1.32
SPN1YPR133C YSP2Q06681 1438 aa6.83□□□□□ -1.32
SPN1YPR133C BNR1P40450 1375 aa6.82□□□□□ -1.32
SPN1YPR133C TY1B-NL2Q99337 1749 aaKnown RBP6.81□□□□□ -1.32
SPN1YPR133C NUP188P52593 1655 aaKnown RBP6.81□□□□□ -1.32
SPN1YPR133C IML1P47170 1584 aa6.79□□□□□ -1.32
SPN1YPR133C AI4P03878 556 aa6.79□□□□□ -1.32
SPN1YPR133C IFH1P39520 1085 aa6.79□□□□□ -1.32
SPN1YPR133C MPH3P0CE00 602 aa6.78□□□□□ -1.32
SPN1YPR133C MID1P41821 548 aa6.78□□□□□ -1.32
SPN1YPR133C SOL3P38858 249 aa6.77□□□□□ -1.33
SPN1YPR133C PEX29Q03370 554 aa6.77□□□□□ -1.33
SPN1YPR133C TAF7Q05021 590 aa6.77□□□□□ -1.33
SPN1YPR133C SPT23P35210 1082 aa6.76□□□□□ -1.33
SPN1YPR133C SAS10Q12136 610 aaPredicted RBP6.76□□□□□ -1.33
SPN1YPR133C HAP1P0CE41 1502 aa6.76□□□□□ -1.33
SPN1YPR133C GEA1P47102 1408 aaPredicted RBP6.76□□□□□ -1.33
SPN1YPR133C DPS1P04802 557 aaKnown RBP6.75□□□□□ -1.33
SPN1YPR133C YPR148CQ06523 435 aa6.74□□□□□ -1.33
SPN1YPR133C HAP5Q02516 242 aa6.72□□□□□ -1.33
SPN1YPR133C URN1Q06525 465 aaKnown RBP6.72□□□□□ -1.33
SPN1YPR133C CKB1P43639 278 aa6.71□□□□□ -1.34
SPN1YPR133C YGR273CP53329 174 aa6.71□□□□□ -1.34
SPN1YPR133C ILV3P39522 585 aaKnown RBP6.7□□□□□ -1.34
SPN1YPR133C THI12P42883 340 aa6.7□□□□□ -1.34
SPN1YPR133C THI5P43534 340 aa6.7□□□□□ -1.34
SPN1YPR133C THI11P47183 340 aa6.7□□□□□ -1.34
SPN1YPR133C BNI4P53858 892 aa6.7□□□□□ -1.34
SPN1YPR133C THI13Q07748 340 aa6.7□□□□□ -1.34
SPN1YPR133C YMR196WQ04336 1088 aa6.69□□□□□ -1.34
SPN1YPR133C VPS70P47161 811 aa6.68□□□□□ -1.34
SPN1YPR133C VMR1P38735 1592 aa6.68□□□□□ -1.34
SPN1YPR133C YML082WQ04533 649 aaKnown RBP6.67□□□□□ -1.34
SPN1YPR133C PTC2P39966 464 aaKnown RBP6.66□□□□□ -1.34
SPN1YPR133C MPC54Q08550 464 aa6.66□□□□□ -1.34
SPN1YPR133C IPL1P38991 367 aa6.64□□□□□ -1.35
SPN1YPR133C GLN1P32288 370 aaKnown RBP6.62□□□□□ -1.35
SPN1YPR133C SRB8P25648 1427 aa6.61□□□□□ -1.35
SPN1YPR133C KEX1P09620 729 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms