RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W NUD1P32336 851 aa9.9□□□□□ -0.82
PRE2YPR103W ERF2Q06551 359 aa9.9□□□□□ -0.82
PRE2YPR103W RAD59Q12223 238 aa9.9□□□□□ -0.82
PRE2YPR103W BIM1P40013 344 aa9.89□□□□□ -0.83
PRE2YPR103W YJL007CP47080 104 aa9.88□□□□□ -0.83
PRE2YPR103W YNL115CP53925 644 aa9.88□□□□□ -0.83
PRE2YPR103W KEX2P13134 814 aa9.87□□□□□ -0.83
PRE2YPR103W RTF1P53064 558 aa9.87□□□□□ -0.83
PRE2YPR103W SLY41P22215 453 aa9.86□□□□□ -0.83
PRE2YPR103W RSC30P38781 883 aa9.86□□□□□ -0.83
PRE2YPR103W ATG32P40458 529 aa9.86□□□□□ -0.83
PRE2YPR103W STR2P47164 639 aa9.86□□□□□ -0.83
PRE2YPR103W RAM1P22007 431 aa9.85□□□□□ -0.83
PRE2YPR103W ISM1P48526 1002 aa9.85□□□□□ -0.83
PRE2YPR103W YBL036CP38197 257 aa9.84□□□□□ -0.83
PRE2YPR103W ARG8P18544 423 aa9.82□□□□□ -0.84
PRE2YPR103W BIO2P32451 375 aa9.82□□□□□ -0.84
PRE2YPR103W BNI4P53858 892 aa9.81□□□□□ -0.84
PRE2YPR103W ELP4Q02884 456 aaKnown RBP9.8□□□□□ -0.84
PRE2YPR103W TY1A-DR4O74302 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-HP0C2I4 478 aaKnown RBP9.79□□□□□ -0.84
PRE2YPR103W TY1A-AP0CX57 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-PR1P0CX58 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-ORP0CX59 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-PR2P0CX60 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-DR5P0CX65 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-ER2P0CX66 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-GR3P0CX67 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-LR1P0CX68 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-MR2P0CX69 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-JR2P47099 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-DR1Q03856 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-ML1Q04706 440 aaKnown RBP9.79□□□□□ -0.84
PRE2YPR103W TY1A-BRQ12217 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-NL2Q12470 440 aa9.79□□□□□ -0.84
PRE2YPR103W TY1A-GR2Q12485 440 aa9.79□□□□□ -0.84
PRE2YPR103W YPR015CQ12531 247 aa9.79□□□□□ -0.84
PRE2YPR103W SEC2P17065 759 aa9.78□□□□□ -0.84
PRE2YPR103W CSE4P36012 229 aa9.78□□□□□ -0.84
PRE2YPR103W BUD20Q08004 166 aaPredicted RBP9.78□□□□□ -0.84
PRE2YPR103W TRM1P15565 570 aaKnown RBP9.77□□□□□ -0.85
PRE2YPR103W NPL4P33755 580 aa9.77□□□□□ -0.85
PRE2YPR103W SPT23P35210 1082 aa9.77□□□□□ -0.85
PRE2YPR103W LAM6Q08001 693 aa9.77□□□□□ -0.85
PRE2YPR103W ERG12P07277 443 aa9.76□□□□□ -0.85
PRE2YPR103W TIF1P10081 395 aaKnown RBP9.76□□□□□ -0.85
PRE2YPR103W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
PRE2YPR103W AGE1Q04412 482 aa9.75□□□□□ -0.85
PRE2YPR103W SIS1P25294 352 aaKnown RBP9.74□□□□□ -0.85
PRE2YPR103W PUS6P53294 404 aa9.74□□□□□ -0.85
PRE2YPR103W BMT6Q12291 365 aa9.74□□□□□ -0.85
PRE2YPR103W GCD11P32481 527 aaKnown RBP9.73□□□□□ -0.85
PRE2YPR103W YNL108CP53929 270 aa9.73□□□□□ -0.85
PRE2YPR103W PRE3P38624 215 aa9.72□□□□□ -0.85
PRE2YPR103W MAK16P10962 306 aaPredicted RBP9.71□□□□□ -0.86
PRE2YPR103W SUP45P12385 437 aaKnown RBP9.71□□□□□ -0.86
PRE2YPR103W PTC2P39966 464 aaKnown RBP9.71□□□□□ -0.86
PRE2YPR103W TUB4P53378 473 aa9.71□□□□□ -0.86
PRE2YPR103W YDJ1P25491 409 aaKnown RBP9.69□□□□□ -0.86
PRE2YPR103W YML082WQ04533 649 aaKnown RBP9.69□□□□□ -0.86
PRE2YPR103W RPL34BP40525 121 aaKnown RBP9.68□□□□□ -0.86
PRE2YPR103W YJL171CP46992 396 aa9.67□□□□□ -0.86
PRE2YPR103W YPR204WQ08995 1032 aa9.66□□□□□ -0.86
PRE2YPR103W ENO2P00925 437 aaKnown RBP9.65□□□□□ -0.86
PRE2YPR103W PRT1P06103 763 aaKnown RBP9.65□□□□□ -0.86
PRE2YPR103W RTG2P32608 588 aaKnown RBP9.65□□□□□ -0.86
PRE2YPR103W CHL1P22516 861 aaPredicted RBP9.64□□□□□ -0.87
PRE2YPR103W SPT5P27692 1063 aaKnown RBP9.64□□□□□ -0.87
PRE2YPR103W PAC1P39946 494 aaKnown RBP9.64□□□□□ -0.87
PRE2YPR103W YDL206WQ12424 762 aa9.64□□□□□ -0.87
PRE2YPR103W TBF1Q02457 562 aa9.63□□□□□ -0.87
PRE2YPR103W TTI1P36097 1038 aa9.61□□□□□ -0.87
PRE2YPR103W SUB2Q07478 446 aaKnown RBP9.61□□□□□ -0.87
PRE2YPR103W RPA14P50106 137 aa9.6□□□□□ -0.87
PRE2YPR103W MRX10Q05648 414 aa9.6□□□□□ -0.87
PRE2YPR103W ENO1P00924 437 aaKnown RBP9.59□□□□□ -0.87
PRE2YPR103W RRN7P40992 514 aa9.59□□□□□ -0.87
PRE2YPR103W NAF1P53919 492 aaKnown RBP9.59□□□□□ -0.87
PRE2YPR103W CPS1P27614 576 aa9.58□□□□□ -0.88
PRE2YPR103W RIM21P48565 533 aa9.58□□□□□ -0.88
PRE2YPR103W YPR097WQ06839 1073 aa9.58□□□□□ -0.88
PRE2YPR103W PDC1P06169 563 aaKnown RBP9.56□□□□□ -0.88
PRE2YPR103W MCM16Q12262 181 aa9.54□□□□□ -0.88
PRE2YPR103W ALR1Q08269 859 aa9.53□□□□□ -0.88
PRE2YPR103W RDS2P19541 446 aaKnown RBP9.52□□□□□ -0.89
PRE2YPR103W SSA4P22202 642 aaKnown RBP9.52□□□□□ -0.89
PRE2YPR103W FIG4P42837 879 aa9.52□□□□□ -0.89
PRE2YPR103W ISF1P32488 338 aa9.5□□□□□ -0.89
PRE2YPR103W SPT16P32558 1035 aaKnown RBP9.5□□□□□ -0.89
PRE2YPR103W KXD1P53158 218 aa9.5□□□□□ -0.89
PRE2YPR103W YPR084WQ06821 456 aa9.5□□□□□ -0.89
PRE2YPR103W MOD5P07884 428 aa9.49□□□□□ -0.89
PRE2YPR103W PAT1P25644 796 aaKnown RBP9.49□□□□□ -0.89
PRE2YPR103W HXT10P43581 546 aa9.49□□□□□ -0.89
PRE2YPR103W NOB1Q08444 459 aaKnown RBP9.49□□□□□ -0.89
PRE2YPR103W PEP12P32854 288 aa9.48□□□□□ -0.89
PRE2YPR103W GYP1Q08484 637 aa9.48□□□□□ -0.89
PRE2YPR103W SSA1P10591 642 aaKnown RBP9.47□□□□□ -0.89
PRE2YPR103W TPD3P31383 635 aa9.47□□□□□ -0.89
PRE2YPR103W EMP47P43555 445 aa9.47□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms