RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeastyeast

Gene IRC16, Length 360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC16YPR038W TY1A-ER2P0CX66 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-GR3P0CX67 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-LR1P0CX68 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-MR2P0CX69 440 aa6.11□□□□□ -1.43
IRC16YPR038W CST6P40535 587 aa6.11□□□□□ -1.43
IRC16YPR038W RRN7P40992 514 aa6.11□□□□□ -1.43
IRC16YPR038W CKB1P43639 278 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-JR2P47099 440 aa6.11□□□□□ -1.43
IRC16YPR038W FRK1Q03002 865 aaPredicted RBP6.11□□□□□ -1.43
IRC16YPR038W TY1A-DR1Q03856 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-ML1Q04706 440 aaKnown RBP6.11□□□□□ -1.43
IRC16YPR038W TY1A-BRQ12217 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-NL2Q12470 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-GR2Q12485 440 aa6.11□□□□□ -1.43
IRC16YPR038W PBS2P08018 668 aa6.1□□□□□ -1.43
IRC16YPR038W RGA1P39083 1007 aa6.1□□□□□ -1.43
IRC16YPR038W AIR1P40507 360 aaKnown RBP6.09□□□□□ -1.43
IRC16YPR038W GCR2Q01722 534 aa6.09□□□□□ -1.43
IRC16YPR038W CLA4P48562 842 aa6.07□□□□□ -1.44
IRC16YPR038W LAM6Q08001 693 aa6.07□□□□□ -1.44
IRC16YPR038W KEX2P13134 814 aa6.06□□□□□ -1.44
IRC16YPR038W BRE2P43132 505 aa6.06□□□□□ -1.44
IRC16YPR038W BDP1P46678 594 aa6.05□□□□□ -1.44
IRC16YPR038W GBP2P25555 427 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
IRC16YPR038W PSE1P32337 1089 aaKnown RBP6.03□□□□□ -1.44
IRC16YPR038W ERF2Q06551 359 aa6.03□□□□□ -1.44
IRC16YPR038W MAM3Q12296 706 aa6.03□□□□□ -1.44
IRC16YPR038W GAR1P28007 205 aaKnown RBP6.02□□□□□ -1.45
IRC16YPR038W RGA2Q06407 1009 aa6.02□□□□□ -1.45
IRC16YPR038W CDC4P07834 779 aa6.01□□□□□ -1.45
IRC16YPR038W CLB5P30283 435 aa6□□□□□ -1.45
IRC16YPR038W HED1Q03937 162 aa5.99□□□□□ -1.45
IRC16YPR038W PAC1P39946 494 aaKnown RBP5.97□□□□□ -1.45
IRC16YPR038W IES2P40154 320 aa5.97□□□□□ -1.45
IRC16YPR038W SPB4P25808 606 aaPredicted RBP5.95□□□□□ -1.46
IRC16YPR038W TEA1P47988 759 aa5.95□□□□□ -1.46
IRC16YPR038W TUB4P53378 473 aa5.95□□□□□ -1.46
IRC16YPR038W YPL062WQ02781 134 aa5.95□□□□□ -1.46
IRC16YPR038W DSF2P38213 736 aa5.94□□□□□ -1.46
IRC16YPR038W YNL115CP53925 644 aa5.94□□□□□ -1.46
IRC16YPR038W RTF1P53064 558 aa5.93□□□□□ -1.46
IRC16YPR038W PUS5Q06244 254 aa5.93□□□□□ -1.46
IRC16YPR038W HST3P53687 447 aa5.92□□□□□ -1.46
IRC16YPR038W ASH1P34233 588 aa5.91□□□□□ -1.46
IRC16YPR038W AGE1Q04412 482 aa5.91□□□□□ -1.46
IRC16YPR038W MOD5P07884 428 aa5.9□□□□□ -1.46
IRC16YPR038W MET22P32179 357 aa5.9□□□□□ -1.46
IRC16YPR038W NUP42P49686 430 aaKnown RBP5.89□□□□□ -1.47
IRC16YPR038W KXD1P53158 218 aa5.89□□□□□ -1.47
IRC16YPR038W MET32Q12041 191 aa5.89□□□□□ -1.47
IRC16YPR038W NIS1P53939 407 aa5.88□□□□□ -1.47
IRC16YPR038W SIT4P20604 311 aa5.87□□□□□ -1.47
IRC16YPR038W YDR444WQ04093 687 aa5.87□□□□□ -1.47
IRC16YPR038W YMR196WQ04336 1088 aa5.87□□□□□ -1.47
IRC16YPR038W ENV9Q08651 330 aa5.87□□□□□ -1.47
IRC16YPR038W DIT2P21595 489 aa5.86□□□□□ -1.47
IRC16YPR038W AFT1P22149 690 aa5.86□□□□□ -1.47
IRC16YPR038W SLY41P22215 453 aa5.86□□□□□ -1.47
IRC16YPR038W HXT10P43581 546 aa5.83□□□□□ -1.48
IRC16YPR038W FPK1P53739 893 aa5.83□□□□□ -1.48
IRC16YPR038W SYH1Q02875 849 aaKnown RBP5.83□□□□□ -1.48
IRC16YPR038W TBF1Q02457 562 aa5.82□□□□□ -1.48
IRC16YPR038W KIP2P28743 706 aa5.8□□□□□ -1.48
IRC16YPR038W RRD1P40454 393 aaKnown RBP5.8□□□□□ -1.48
IRC16YPR038W YJR115WP47152 169 aa5.8□□□□□ -1.48
IRC16YPR038W PDC1P06169 563 aaKnown RBP5.79□□□□□ -1.48
IRC16YPR038W TPD3P31383 635 aa5.79□□□□□ -1.48
IRC16YPR038W PUS6P53294 404 aa5.79□□□□□ -1.48
IRC16YPR038W LCB5Q06147 687 aaKnown RBP5.79□□□□□ -1.48
IRC16YPR038W ALR1Q08269 859 aa5.79□□□□□ -1.48
IRC16YPR038W LEU3P08638 886 aa5.78□□□□□ -1.48
IRC16YPR038W UGA3P26370 528 aa5.78□□□□□ -1.48
IRC16YPR038W ATF2P53296 535 aa5.78□□□□□ -1.48
IRC16YPR038W YNR021WP53723 404 aaKnown RBP5.77□□□□□ -1.49
IRC16YPR038W YDL206WQ12424 762 aa5.77□□□□□ -1.49
IRC16YPR038W SRF1Q12516 437 aa5.77□□□□□ -1.49
IRC16YPR038W SCJ1P25303 377 aa5.76□□□□□ -1.49
IRC16YPR038W MSB3P48566 633 aaPredicted RBP5.76□□□□□ -1.49
IRC16YPR038W RPA14P50106 137 aa5.76□□□□□ -1.49
IRC16YPR038W IXR1P33417 597 aa5.75□□□□□ -1.49
IRC16YPR038W MMP1Q12372 583 aa5.74□□□□□ -1.49
IRC16YPR038W TRM1P15565 570 aaKnown RBP5.73□□□□□ -1.49
IRC16YPR038W HST2P53686 357 aa5.73□□□□□ -1.49
IRC16YPR038W YPR097WQ06839 1073 aa5.73□□□□□ -1.49
IRC16YPR038W GLN1P32288 370 aaKnown RBP5.72□□□□□ -1.49
IRC16YPR038W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
IRC16YPR038W YLR346CQ06139 101 aa5.71□□□□□ -1.5
IRC16YPR038W PTK2P47116 818 aaKnown RBP5.7□□□□□ -1.5
IRC16YPR038W YDL176WQ12027 708 aa5.7□□□□□ -1.5
IRC16YPR038W AIM7Q12156 149 aa5.7□□□□□ -1.5
IRC16YPR038W ESS1P22696 170 aa5.69□□□□□ -1.5
IRC16YPR038W GLC3P32775 704 aa5.68□□□□□ -1.5
IRC16YPR038W TYW1Q08960 810 aaKnown RBP5.68□□□□□ -1.5
IRC16YPR038W RPN1P38764 993 aaKnown RBP5.67□□□□□ -1.5
IRC16YPR038W CAF120P53836 1060 aa5.67□□□□□ -1.5
IRC16YPR038W OPT2Q06593 877 aa5.67□□□□□ -1.5
IRC16YPR038W YJU3P28321 313 aa5.65□□□□□ -1.5
IRC16YPR038W MRT4P33201 236 aaKnown RBP5.65□□□□□ -1.5
IRC16YPR038W RTT106P40161 455 aa5.64□□□□□ -1.51
IRC16YPR038W NUP85P46673 744 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms