RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W SIT4P20604 311 aa8.81□□□□□ -1
YDC1YPL087W HPC2Q01448 625 aa8.8□□□□□ -1
YDC1YPL087W GUA1P38625 525 aaKnown RBP8.79□□□□□ -1
YDC1YPL087W YNL115CP53925 644 aa8.79□□□□□ -1
YDC1YPL087W MMP1Q12372 583 aa8.79□□□□□ -1
YDC1YPL087W RAM1P22007 431 aa8.77□□□□□ -1.01
YDC1YPL087W BRL1P38770 471 aa8.77□□□□□ -1.01
YDC1YPL087W GCD11P32481 527 aaKnown RBP8.76□□□□□ -1.01
YDC1YPL087W STR2P47164 639 aa8.75□□□□□ -1.01
YDC1YPL087W ISM1P48526 1002 aa8.75□□□□□ -1.01
YDC1YPL087W PRT1P06103 763 aaKnown RBP8.74□□□□□ -1.01
YDC1YPL087W SAS4Q04003 481 aa8.74□□□□□ -1.01
YDC1YPL087W KEX2P13134 814 aa8.73□□□□□ -1.01
YDC1YPL087W SLY41P22215 453 aa8.73□□□□□ -1.01
YDC1YPL087W PAT1P25644 796 aaKnown RBP8.73□□□□□ -1.01
YDC1YPL087W GYP1Q08484 637 aa8.73□□□□□ -1.01
YDC1YPL087W BUD20Q08004 166 aaPredicted RBP8.71□□□□□ -1.02
YDC1YPL087W TYW1Q08960 810 aaKnown RBP8.71□□□□□ -1.02
YDC1YPL087W DMA2P53924 522 aa8.69□□□□□ -1.02
YDC1YPL087W PKH3Q03306 898 aaPredicted RBP8.69□□□□□ -1.02
YDC1YPL087W YPR015CQ12531 247 aa8.69□□□□□ -1.02
YDC1YPL087W ESS1P22696 170 aa8.68□□□□□ -1.02
YDC1YPL087W TBF1Q02457 562 aa8.68□□□□□ -1.02
YDC1YPL087W LAM6Q08001 693 aa8.68□□□□□ -1.02
YDC1YPL087W SCJ1P25303 377 aa8.67□□□□□ -1.02
YDC1YPL087W KTR1P27810 393 aaKnown RBP8.67□□□□□ -1.02
YDC1YPL087W SPT16P32558 1035 aaKnown RBP8.67□□□□□ -1.02
YDC1YPL087W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
YDC1YPL087W PUS6P53294 404 aa8.67□□□□□ -1.02
YDC1YPL087W MRF1P30775 413 aaPredicted RBP8.66□□□□□ -1.02
YDC1YPL087W TFB3Q03290 321 aa8.66□□□□□ -1.02
YDC1YPL087W DPS1P04802 557 aaKnown RBP8.65□□□□□ -1.02
YDC1YPL087W ERF2Q06551 359 aa8.65□□□□□ -1.02
YDC1YPL087W TY1A-DR4O74302 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-HP0C2I4 478 aaKnown RBP8.64□□□□□ -1.03
YDC1YPL087W TY1A-AP0CX57 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-PR1P0CX58 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-ORP0CX59 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-PR2P0CX60 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-DR5P0CX65 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-ER2P0CX66 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-GR3P0CX67 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-LR1P0CX68 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-MR2P0CX69 440 aa8.64□□□□□ -1.03
YDC1YPL087W ARG8P18544 423 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-JR2P47099 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-DR1Q03856 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-ML1Q04706 440 aaKnown RBP8.64□□□□□ -1.03
YDC1YPL087W TY1A-BRQ12217 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-NL2Q12470 440 aa8.64□□□□□ -1.03
YDC1YPL087W TY1A-GR2Q12485 440 aa8.64□□□□□ -1.03
YDC1YPL087W SEC2P17065 759 aa8.62□□□□□ -1.03
YDC1YPL087W RAD59Q12223 238 aa8.62□□□□□ -1.03
YDC1YPL087W TRM1P15565 570 aaKnown RBP8.61□□□□□ -1.03
YDC1YPL087W RRN7P40992 514 aa8.61□□□□□ -1.03
YDC1YPL087W TUB4P53378 473 aa8.61□□□□□ -1.03
YDC1YPL087W TAF7Q05021 590 aa8.61□□□□□ -1.03
YDC1YPL087W YJU3P28321 313 aa8.6□□□□□ -1.03
YDC1YPL087W CSE4P36012 229 aa8.6□□□□□ -1.03
YDC1YPL087W KXD1P53158 218 aa8.59□□□□□ -1.03
YDC1YPL087W ERG12P07277 443 aa8.58□□□□□ -1.04
YDC1YPL087W YBL036CP38197 257 aa8.58□□□□□ -1.04
YDC1YPL087W AGE1Q04412 482 aa8.57□□□□□ -1.04
YDC1YPL087W ALR1Q08269 859 aa8.57□□□□□ -1.04
YDC1YPL087W RPA14P50106 137 aa8.56□□□□□ -1.04
YDC1YPL087W RSC30P38781 883 aa8.55□□□□□ -1.04
YDC1YPL087W YDL206WQ12424 762 aa8.55□□□□□ -1.04
YDC1YPL087W YEL077CQ3E7X8 1277 aa8.54□□□□□ -1.04
YDC1YPL087W PKC1P24583 1151 aa8.52□□□□□ -1.05
YDC1YPL087W SPT5P27692 1063 aaKnown RBP8.52□□□□□ -1.05
YDC1YPL087W PAC1P39946 494 aaKnown RBP8.52□□□□□ -1.05
YDC1YPL087W YPR097WQ06839 1073 aa8.52□□□□□ -1.05
YDC1YPL087W MAK16P10962 306 aaPredicted RBP8.5□□□□□ -1.05
YDC1YPL087W HXT10P43581 546 aa8.49□□□□□ -1.05
YDC1YPL087W TPD3P31383 635 aa8.48□□□□□ -1.05
YDC1YPL087W RPL34BP40525 121 aaKnown RBP8.48□□□□□ -1.05
YDC1YPL087W YJL007CP47080 104 aa8.48□□□□□ -1.05
YDC1YPL087W NAF1P53919 492 aaKnown RBP8.48□□□□□ -1.05
YDC1YPL087W PDC1P06169 563 aaKnown RBP8.47□□□□□ -1.05
YDC1YPL087W RLF2Q12495 606 aa8.45□□□□□ -1.06
YDC1YPL087W RRD1P40454 393 aaKnown RBP8.44□□□□□ -1.06
YDC1YPL087W MOD5P07884 428 aa8.43□□□□□ -1.06
YDC1YPL087W AMS1P22855 1083 aa8.43□□□□□ -1.06
YDC1YPL087W BIM1P40013 344 aa8.43□□□□□ -1.06
YDC1YPL087W YPP1P46951 817 aa8.42□□□□□ -1.06
YDC1YPL087W INO80P53115 1489 aa8.42□□□□□ -1.06
YDC1YPL087W SDH2P21801 266 aa8.4□□□□□ -1.06
YDC1YPL087W TEC1P18412 486 aa8.39□□□□□ -1.07
YDC1YPL087W BIO2P32451 375 aa8.39□□□□□ -1.07
YDC1YPL087W BDP1P46678 594 aa8.39□□□□□ -1.07
YDC1YPL087W FRK1Q03002 865 aaPredicted RBP8.39□□□□□ -1.07
YDC1YPL087W SRC1Q03707 834 aa8.39□□□□□ -1.07
YDC1YPL087W KIP2P28743 706 aa8.37□□□□□ -1.07
YDC1YPL087W ATG32P40458 529 aa8.37□□□□□ -1.07
YDC1YPL087W YNL108CP53929 270 aa8.37□□□□□ -1.07
YDC1YPL087W SYH1Q02875 849 aaKnown RBP8.37□□□□□ -1.07
YDC1YPL087W MON2P48563 1636 aaPredicted RBP8.36□□□□□ -1.07
YDC1YPL087W TIF1P10081 395 aaKnown RBP8.35□□□□□ -1.07
YDC1YPL087W SUP45P12385 437 aaKnown RBP8.35□□□□□ -1.07
YDC1YPL087W VAC17P25591 423 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 6.2 ms