RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W TY1A-LR1P0CX68 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-MR2P0CX69 440 aa6.45□□□□□ -1.38
UBP16YPL072W GCD11P32481 527 aaKnown RBP6.45□□□□□ -1.38
UBP16YPL072W TY1A-JR2P47099 440 aa6.45□□□□□ -1.38
UBP16YPL072W TEA1P47988 759 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-DR1Q03856 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-ML1Q04706 440 aaKnown RBP6.45□□□□□ -1.38
UBP16YPL072W TY1A-BRQ12217 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-NL2Q12470 440 aa6.45□□□□□ -1.38
UBP16YPL072W TY1A-GR2Q12485 440 aa6.45□□□□□ -1.38
UBP16YPL072W SEC2P17065 759 aa6.44□□□□□ -1.38
UBP16YPL072W MRF1P30775 413 aaPredicted RBP6.44□□□□□ -1.38
UBP16YPL072W SDH2P21801 266 aa6.43□□□□□ -1.38
UBP16YPL072W YNR021WP53723 404 aaKnown RBP6.42□□□□□ -1.38
UBP16YPL072W KEX2P13134 814 aa6.4□□□□□ -1.38
UBP16YPL072W AMS1P22855 1083 aa6.4□□□□□ -1.38
UBP16YPL072W RAS1P01119 309 aa6.4□□□□□ -1.39
UBP16YPL072W SIT4P20604 311 aa6.4□□□□□ -1.39
UBP16YPL072W RTF1P53064 558 aa6.4□□□□□ -1.39
UBP16YPL072W ERF2Q06551 359 aa6.4□□□□□ -1.39
UBP16YPL072W NIS1P53939 407 aa6.39□□□□□ -1.39
UBP16YPL072W YEL077CQ3E7X8 1277 aa6.39□□□□□ -1.39
UBP16YPL072W SPT16P32558 1035 aaKnown RBP6.38□□□□□ -1.39
UBP16YPL072W ATF2P53296 535 aa6.38□□□□□ -1.39
UBP16YPL072W ERG12P07277 443 aa6.36□□□□□ -1.39
UBP16YPL072W PAT1P25644 796 aaKnown RBP6.36□□□□□ -1.39
UBP16YPL072W GLC3P32775 704 aa6.36□□□□□ -1.39
UBP16YPL072W RRN7P40992 514 aa6.36□□□□□ -1.39
UBP16YPL072W YNL115CP53925 644 aa6.36□□□□□ -1.39
UBP16YPL072W LEU3P08638 886 aa6.35□□□□□ -1.39
UBP16YPL072W FPK1P53739 893 aa6.35□□□□□ -1.39
UBP16YPL072W AIM7Q12156 149 aa6.34□□□□□ -1.39
UBP16YPL072W SRC1Q03707 834 aa6.33□□□□□ -1.4
UBP16YPL072W YMR196WQ04336 1088 aa6.33□□□□□ -1.4
UBP16YPL072W AGE1Q04412 482 aa6.33□□□□□ -1.4
UBP16YPL072W TUB4P53378 473 aa6.32□□□□□ -1.4
UBP16YPL072W PAC1P39946 494 aaKnown RBP6.3□□□□□ -1.4
UBP16YPL072W CST6P40535 587 aa6.3□□□□□ -1.4
UBP16YPL072W HST2P53686 357 aa6.3□□□□□ -1.4
UBP16YPL072W LAM6Q08001 693 aa6.29□□□□□ -1.4
UBP16YPL072W SLY41P22215 453 aa6.28□□□□□ -1.4
UBP16YPL072W MOD5P07884 428 aa6.26□□□□□ -1.41
UBP16YPL072W BDP1P46678 594 aa6.26□□□□□ -1.41
UBP16YPL072W MMP1Q12372 583 aa6.26□□□□□ -1.41
UBP16YPL072W SCJ1P25303 377 aa6.25□□□□□ -1.41
UBP16YPL072W GLN1P32288 370 aaKnown RBP6.25□□□□□ -1.41
UBP16YPL072W FRK1Q03002 865 aaPredicted RBP6.25□□□□□ -1.41
UBP16YPL072W TRK1P12685 1235 aa6.25□□□□□ -1.41
UBP16YPL072W RPN1P38764 993 aaKnown RBP6.24□□□□□ -1.41
UBP16YPL072W PUS6P53294 404 aa6.24□□□□□ -1.41
UBP16YPL072W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
UBP16YPL072W KXD1P53158 218 aa6.23□□□□□ -1.41
UBP16YPL072W TPD3P31383 635 aa6.22□□□□□ -1.41
UBP16YPL072W ESS1P22696 170 aa6.21□□□□□ -1.42
UBP16YPL072W CLA4P48562 842 aa6.21□□□□□ -1.42
UBP16YPL072W TYW1Q08960 810 aaKnown RBP6.21□□□□□ -1.42
UBP16YPL072W KIN1P13185 1064 aa6.2□□□□□ -1.42
UBP16YPL072W KTR1P27810 393 aaKnown RBP6.2□□□□□ -1.42
UBP16YPL072W CSN12P47130 423 aa6.2□□□□□ -1.42
UBP16YPL072W TBF1Q02457 562 aa6.2□□□□□ -1.42
UBP16YPL072W HED1Q03937 162 aa6.2□□□□□ -1.42
UBP16YPL072W TRM1P15565 570 aaKnown RBP6.2□□□□□ -1.42
UBP16YPL072W AIR1P40507 360 aaKnown RBP6.2□□□□□ -1.42
UBP16YPL072W HXT10P43581 546 aa6.2□□□□□ -1.42
UBP16YPL072W PDC1P06169 563 aaKnown RBP6.19□□□□□ -1.42
UBP16YPL072W RPA14P50106 137 aa6.19□□□□□ -1.42
UBP16YPL072W YPR097WQ06839 1073 aa6.19□□□□□ -1.42
UBP16YPL072W YDL206WQ12424 762 aa6.19□□□□□ -1.42
UBP16YPL072W YJU3P28321 313 aa6.18□□□□□ -1.42
UBP16YPL072W RRD1P40454 393 aaKnown RBP6.18□□□□□ -1.42
UBP16YPL072W ALR1Q08269 859 aa6.18□□□□□ -1.42
UBP16YPL072W CDC4P07834 779 aa6.17□□□□□ -1.42
UBP16YPL072W RSC30P38781 883 aa6.16□□□□□ -1.42
UBP16YPL072W PUS5Q06244 254 aa6.16□□□□□ -1.42
UBP16YPL072W PKH3Q03306 898 aaPredicted RBP6.15□□□□□ -1.42
UBP16YPL072W RGA2Q06407 1009 aa6.15□□□□□ -1.43
UBP16YPL072W SSA2P10592 639 aaKnown RBP6.14□□□□□ -1.43
UBP16YPL072W SYH1Q02875 849 aaKnown RBP6.12□□□□□ -1.43
UBP16YPL072W ARG8P18544 423 aa6.11□□□□□ -1.43
UBP16YPL072W BRE2P43132 505 aa6.1□□□□□ -1.43
UBP16YPL072W MET32Q12041 191 aa6.1□□□□□ -1.43
UBP16YPL072W RAD59Q12223 238 aa6.1□□□□□ -1.43
UBP16YPL072W GUA1P38625 525 aaKnown RBP6.09□□□□□ -1.43
UBP16YPL072W GCR2Q01722 534 aa6.09□□□□□ -1.43
UBP16YPL072W AFT1P22149 690 aa6.08□□□□□ -1.44
UBP16YPL072W KIP2P28743 706 aa6.08□□□□□ -1.44
UBP16YPL072W ASH1P34233 588 aa6.07□□□□□ -1.44
UBP16YPL072W VAC17P25591 423 aa6.06□□□□□ -1.44
UBP16YPL072W IXR1P33417 597 aa6.06□□□□□ -1.44
UBP16YPL072W HST3P53687 447 aa6.06□□□□□ -1.44
UBP16YPL072W HPC2Q01448 625 aa6.05□□□□□ -1.44
UBP16YPL072W MRT4P33201 236 aaKnown RBP6.03□□□□□ -1.44
UBP16YPL072W MAK16P10962 306 aaPredicted RBP6.01□□□□□ -1.45
UBP16YPL072W MSB3P48566 633 aaPredicted RBP6.01□□□□□ -1.45
UBP16YPL072W FIG4P42837 879 aa6□□□□□ -1.45
UBP16YPL072W CSE4P36012 229 aa5.99□□□□□ -1.45
UBP16YPL072W RGA1P39083 1007 aa5.99□□□□□ -1.45
UBP16YPL072W RTT106P40161 455 aa5.99□□□□□ -1.45
UBP16YPL072W BRL1P38770 471 aa5.99□□□□□ -1.45
UBP16YPL072W YJR115WP47152 169 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms