RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C TY1A-DR1Q03856 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-ML1Q04706 440 aaKnown RBP7.5□□□□□ -1.21
VPS21YOR089C TY1A-BRQ12217 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-NL2Q12470 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-GR2Q12485 440 aa7.5□□□□□ -1.21
VPS21YOR089C SEC2P17065 759 aa7.48□□□□□ -1.21
VPS21YOR089C RGR1P19263 1082 aa7.48□□□□□ -1.21
VPS21YOR089C YPR109WQ06104 294 aa7.46□□□□□ -1.22
VPS21YOR089C YEL077CQ3E7X8 1277 aa7.45□□□□□ -1.22
VPS21YOR089C PBS2P08018 668 aa7.43□□□□□ -1.22
VPS21YOR089C TRK1P12685 1235 aa7.43□□□□□ -1.22
VPS21YOR089C MRF1P30775 413 aaPredicted RBP7.43□□□□□ -1.22
VPS21YOR089C GCD11P32481 527 aaKnown RBP7.42□□□□□ -1.22
VPS21YOR089C CST6P40535 587 aa7.41□□□□□ -1.22
VPS21YOR089C NPL4P33755 580 aa7.4□□□□□ -1.22
VPS21YOR089C DMA2P53924 522 aa7.39□□□□□ -1.23
VPS21YOR089C CLA4P48562 842 aa7.38□□□□□ -1.23
VPS21YOR089C ERF2Q06551 359 aa7.38□□□□□ -1.23
VPS21YOR089C ERG12P07277 443 aa7.36□□□□□ -1.23
VPS21YOR089C KEX2P13134 814 aa7.35□□□□□ -1.23
VPS21YOR089C PSE1P32337 1089 aaKnown RBP7.35□□□□□ -1.23
VPS21YOR089C AIR1P40507 360 aaKnown RBP7.35□□□□□ -1.23
VPS21YOR089C LAM6Q08001 693 aa7.35□□□□□ -1.23
VPS21YOR089C DSF2P38213 736 aa7.34□□□□□ -1.23
VPS21YOR089C RRN7P40992 514 aa7.34□□□□□ -1.23
VPS21YOR089C HGH1P48362 394 aaKnown RBP7.34□□□□□ -1.23
VPS21YOR089C SPT16P32558 1035 aaKnown RBP7.33□□□□□ -1.24
VPS21YOR089C MAM3Q12296 706 aa7.32□□□□□ -1.24
VPS21YOR089C IES2P40154 320 aa7.31□□□□□ -1.24
VPS21YOR089C YNR021WP53723 404 aaKnown RBP7.3□□□□□ -1.24
VPS21YOR089C BDP1P46678 594 aa7.29□□□□□ -1.24
VPS21YOR089C NUP42P49686 430 aaKnown RBP7.29□□□□□ -1.24
VPS21YOR089C FRK1Q03002 865 aaPredicted RBP7.29□□□□□ -1.24
VPS21YOR089C RLF2Q12495 606 aa7.29□□□□□ -1.24
VPS21YOR089C PAC1P39946 494 aaKnown RBP7.28□□□□□ -1.24
VPS21YOR089C AGE1Q04412 482 aa7.28□□□□□ -1.24
VPS21YOR089C RGA1P39083 1007 aa7.26□□□□□ -1.25
VPS21YOR089C CLB5P30283 435 aa7.24□□□□□ -1.25
VPS21YOR089C MOD5P07884 428 aa7.23□□□□□ -1.25
VPS21YOR089C KIN1P13185 1064 aa7.23□□□□□ -1.25
VPS21YOR089C PAT1P25644 796 aaKnown RBP7.23□□□□□ -1.25
VPS21YOR089C AIM7Q12156 149 aa7.23□□□□□ -1.25
VPS21YOR089C DIT2P21595 489 aa7.22□□□□□ -1.25
VPS21YOR089C BRE2P43132 505 aa7.22□□□□□ -1.25
VPS21YOR089C TUB4P53378 473 aa7.22□□□□□ -1.25
VPS21YOR089C RGA2Q06407 1009 aa7.22□□□□□ -1.25
VPS21YOR089C SIT4P20604 311 aa7.21□□□□□ -1.26
VPS21YOR089C CDC4P07834 779 aa7.2□□□□□ -1.26
VPS21YOR089C RTF1P53064 558 aa7.2□□□□□ -1.26
VPS21YOR089C NIS1P53939 407 aa7.2□□□□□ -1.26
VPS21YOR089C YNL115CP53925 644 aa7.19□□□□□ -1.26
VPS21YOR089C TEA1P47988 759 aa7.18□□□□□ -1.26
VPS21YOR089C HED1Q03937 162 aa7.18□□□□□ -1.26
VPS21YOR089C GLC3P32775 704 aa7.16□□□□□ -1.26
VPS21YOR089C ATF2P53296 535 aa7.14□□□□□ -1.27
VPS21YOR089C PUS5Q06244 254 aa7.14□□□□□ -1.27
VPS21YOR089C MET32Q12041 191 aa7.13□□□□□ -1.27
VPS21YOR089C FPK1P53739 893 aa7.11□□□□□ -1.27
VPS21YOR089C GCR2Q01722 534 aa7.11□□□□□ -1.27
VPS21YOR089C YPL062WQ02781 134 aa7.09□□□□□ -1.27
VPS21YOR089C PDC1P06169 563 aaKnown RBP7.07□□□□□ -1.28
VPS21YOR089C SLY41P22215 453 aa7.07□□□□□ -1.28
VPS21YOR089C TPD3P31383 635 aa7.07□□□□□ -1.28
VPS21YOR089C ASH1P34233 588 aa7.06□□□□□ -1.28
VPS21YOR089C AFT1P22149 690 aa7.05□□□□□ -1.28
VPS21YOR089C SCJ1P25303 377 aa7.05□□□□□ -1.28
VPS21YOR089C GAR1P28007 205 aaKnown RBP7.05□□□□□ -1.28
VPS21YOR089C MET22P32179 357 aa7.05□□□□□ -1.28
VPS21YOR089C RRD1P40454 393 aaKnown RBP7.05□□□□□ -1.28
VPS21YOR089C HXT10P43581 546 aa7.05□□□□□ -1.28
VPS21YOR089C HPC2Q01448 625 aa7.05□□□□□ -1.28
VPS21YOR089C GUA1P38625 525 aaKnown RBP7.04□□□□□ -1.28
VPS21YOR089C KXD1P53158 218 aa7.04□□□□□ -1.28
VPS21YOR089C YMR196WQ04336 1088 aa7.04□□□□□ -1.28
VPS21YOR089C ENV9Q08651 330 aa7.02□□□□□ -1.29
VPS21YOR089C BRL1P38770 471 aa7.01□□□□□ -1.29
VPS21YOR089C HST2P53686 357 aa7.01□□□□□ -1.29
VPS21YOR089C SSA2P10592 639 aaKnown RBP7□□□□□ -1.29
VPS21YOR089C YDL206WQ12424 762 aa7□□□□□ -1.29
VPS21YOR089C TRM1P15565 570 aaKnown RBP6.99□□□□□ -1.29
VPS21YOR089C RPA14P50106 137 aa6.99□□□□□ -1.29
VPS21YOR089C PUS6P53294 404 aa6.99□□□□□ -1.29
VPS21YOR089C HST3P53687 447 aa6.99□□□□□ -1.29
VPS21YOR089C YJR115WP47152 169 aa6.97□□□□□ -1.29
VPS21YOR089C YDR444WQ04093 687 aa6.97□□□□□ -1.29
VPS21YOR089C YPR097WQ06839 1073 aa6.97□□□□□ -1.29
VPS21YOR089C MMP1Q12372 583 aa6.97□□□□□ -1.29
VPS21YOR089C SYH1Q02875 849 aaKnown RBP6.96□□□□□ -1.3
VPS21YOR089C ESS1P22696 170 aa6.95□□□□□ -1.3
VPS21YOR089C TBF1Q02457 562 aa6.95□□□□□ -1.3
VPS21YOR089C ALR1Q08269 859 aa6.95□□□□□ -1.3
VPS21YOR089C GBP2P25555 427 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
VPS21YOR089C YJU3P28321 313 aa6.94□□□□□ -1.3
VPS21YOR089C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
VPS21YOR089C TFB3Q03290 321 aa6.94□□□□□ -1.3
VPS21YOR089C LCB5Q06147 687 aaKnown RBP6.94□□□□□ -1.3
VPS21YOR089C GLN1P32288 370 aaKnown RBP6.93□□□□□ -1.3
VPS21YOR089C TYW1Q08960 810 aaKnown RBP6.93□□□□□ -1.3
VPS21YOR089C YDL176WQ12027 708 aa6.93□□□□□ -1.3
VPS21YOR089C KTR1P27810 393 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms