RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C SIT4P20604 311 aa5.7□□□□□ -1.5
SHE4YOR035C GLN1P32288 370 aaKnown RBP5.7□□□□□ -1.5
SHE4YOR035C DMA2P53924 522 aa5.7□□□□□ -1.5
SHE4YOR035C MMP1Q12372 583 aa5.7□□□□□ -1.5
SHE4YOR035C YPR015CQ12531 247 aa5.7□□□□□ -1.5
SHE4YOR035C SCJ1P25303 377 aa5.7□□□□□ -1.5
SHE4YOR035C GCD11P32481 527 aaKnown RBP5.7□□□□□ -1.5
SHE4YOR035C KTR1P27810 393 aaKnown RBP5.69□□□□□ -1.5
SHE4YOR035C YNL115CP53925 644 aa5.69□□□□□ -1.5
SHE4YOR035C ERF2Q06551 359 aa5.69□□□□□ -1.5
SHE4YOR035C RTF1P53064 558 aa5.68□□□□□ -1.5
SHE4YOR035C SLY41P22215 453 aa5.67□□□□□ -1.5
SHE4YOR035C ESS1P22696 170 aa5.67□□□□□ -1.5
SHE4YOR035C HPC2Q01448 625 aa5.67□□□□□ -1.5
SHE4YOR035C BUD20Q08004 166 aaPredicted RBP5.67□□□□□ -1.5
SHE4YOR035C HGH1P48362 394 aaKnown RBP5.66□□□□□ -1.5
SHE4YOR035C PKH3Q03306 898 aaPredicted RBP5.66□□□□□ -1.5
SHE4YOR035C VRP1P37370 817 aa5.66□□□□□ -1.5
SHE4YOR035C PRT1P06103 763 aaKnown RBP5.65□□□□□ -1.5
SHE4YOR035C BRL1P38770 471 aa5.65□□□□□ -1.5
SHE4YOR035C TFB3Q03290 321 aa5.65□□□□□ -1.5
SHE4YOR035C GYP1Q08484 637 aa5.65□□□□□ -1.51
SHE4YOR035C TY1A-DR4O74302 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-HP0C2I4 478 aaKnown RBP5.64□□□□□ -1.51
SHE4YOR035C TY1A-AP0CX57 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-PR1P0CX58 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-ORP0CX59 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-PR2P0CX60 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-DR5P0CX65 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-ER2P0CX66 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-GR3P0CX67 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-LR1P0CX68 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-MR2P0CX69 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-JR2P47099 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-DR1Q03856 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-ML1Q04706 440 aaKnown RBP5.64□□□□□ -1.51
SHE4YOR035C TY1A-BRQ12217 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-NL2Q12470 440 aa5.64□□□□□ -1.51
SHE4YOR035C TY1A-GR2Q12485 440 aa5.64□□□□□ -1.51
SHE4YOR035C YJU3P28321 313 aa5.64□□□□□ -1.51
SHE4YOR035C BCK2P33306 851 aa5.63□□□□□ -1.51
SHE4YOR035C SEC2P17065 759 aa5.62□□□□□ -1.51
SHE4YOR035C ARG8P18544 423 aa5.61□□□□□ -1.51
SHE4YOR035C RRN7P40992 514 aa5.61□□□□□ -1.51
SHE4YOR035C TBF1Q02457 562 aa5.61□□□□□ -1.51
SHE4YOR035C RAD59Q12223 238 aa5.61□□□□□ -1.51
SHE4YOR035C TRM1P15565 570 aaKnown RBP5.6□□□□□ -1.51
SHE4YOR035C PUS6P53294 404 aa5.6□□□□□ -1.51
SHE4YOR035C TUB4P53378 473 aa5.6□□□□□ -1.51
SHE4YOR035C PAT1P25644 796 aaKnown RBP5.59□□□□□ -1.51
SHE4YOR035C SPT16P32558 1035 aaKnown RBP5.59□□□□□ -1.51
SHE4YOR035C SAS4Q04003 481 aa5.59□□□□□ -1.51
SHE4YOR035C LAM6Q08001 693 aa5.59□□□□□ -1.51
SHE4YOR035C PKC1P24583 1151 aa5.59□□□□□ -1.51
SHE4YOR035C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
SHE4YOR035C AGE1Q04412 482 aa5.58□□□□□ -1.52
SHE4YOR035C YBL036CP38197 257 aa5.57□□□□□ -1.52
SHE4YOR035C PAC1P39946 494 aaKnown RBP5.57□□□□□ -1.52
SHE4YOR035C TAF7Q05021 590 aa5.56□□□□□ -1.52
SHE4YOR035C YDL206WQ12424 762 aa5.56□□□□□ -1.52
SHE4YOR035C RSC30P38781 883 aa5.55□□□□□ -1.52
SHE4YOR035C XDJ1P39102 459 aa5.54□□□□□ -1.52
SHE4YOR035C MRF1P30775 413 aaPredicted RBP5.53□□□□□ -1.52
SHE4YOR035C KXD1P53158 218 aa5.53□□□□□ -1.52
SHE4YOR035C ERG12P07277 443 aa5.53□□□□□ -1.52
SHE4YOR035C YJL007CP47080 104 aa5.53□□□□□ -1.52
SHE4YOR035C RPA14P50106 137 aa5.52□□□□□ -1.53
SHE4YOR035C ALR1Q08269 859 aa5.52□□□□□ -1.53
SHE4YOR035C CSE4P36012 229 aa5.51□□□□□ -1.53
SHE4YOR035C PDC1P06169 563 aaKnown RBP5.5□□□□□ -1.53
SHE4YOR035C YPR097WQ06839 1073 aa5.5□□□□□ -1.53
SHE4YOR035C MAK16P10962 306 aaPredicted RBP5.5□□□□□ -1.53
SHE4YOR035C SDH2P21801 266 aa5.5□□□□□ -1.53
SHE4YOR035C BIO2P32451 375 aa5.5□□□□□ -1.53
SHE4YOR035C BIM1P40013 344 aa5.5□□□□□ -1.53
SHE4YOR035C RPL34BP40525 121 aaKnown RBP5.49□□□□□ -1.53
SHE4YOR035C YEL077CQ3E7X8 1277 aa5.49□□□□□ -1.53
SHE4YOR035C HXT10P43581 546 aa5.48□□□□□ -1.53
SHE4YOR035C ATG32P40458 529 aa5.48□□□□□ -1.53
SHE4YOR035C YNL108CP53929 270 aa5.47□□□□□ -1.53
SHE4YOR035C FRK1Q03002 865 aaPredicted RBP5.47□□□□□ -1.53
SHE4YOR035C SPT5P27692 1063 aaKnown RBP5.47□□□□□ -1.53
SHE4YOR035C MOD5P07884 428 aa5.46□□□□□ -1.54
SHE4YOR035C RRD1P40454 393 aaKnown RBP5.45□□□□□ -1.54
SHE4YOR035C CST6P40535 587 aa5.45□□□□□ -1.54
SHE4YOR035C AMS1P22855 1083 aa5.45□□□□□ -1.54
SHE4YOR035C BDP1P46678 594 aa5.45□□□□□ -1.54
SHE4YOR035C RLF2Q12495 606 aa5.45□□□□□ -1.54
SHE4YOR035C YDJ1P25491 409 aaKnown RBP5.44□□□□□ -1.54
SHE4YOR035C TPD3P31383 635 aa5.44□□□□□ -1.54
SHE4YOR035C NAF1P53919 492 aaKnown RBP5.44□□□□□ -1.54
SHE4YOR035C PUS5Q06244 254 aa5.43□□□□□ -1.54
SHE4YOR035C TIF1P10081 395 aaKnown RBP5.43□□□□□ -1.54
SHE4YOR035C TEC1P18412 486 aa5.43□□□□□ -1.54
SHE4YOR035C FIG4P42837 879 aa5.42□□□□□ -1.54
SHE4YOR035C RAS1P01119 309 aa5.42□□□□□ -1.54
SHE4YOR035C ENO2P00925 437 aaKnown RBP5.41□□□□□ -1.54
SHE4YOR035C DPS1P04802 557 aaKnown RBP5.41□□□□□ -1.54
SHE4YOR035C SUP45P12385 437 aaKnown RBP5.41□□□□□ -1.54
SHE4YOR035C KIP2P28743 706 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms