RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	SSA4	P22202	642 aa	Known RBP	4.92	□□□□□ -1.62
LDS2	YOL047C	MPC54	Q08550	464 aa		4.92	□□□□□ -1.62
LDS2	YOL047C	SLD2	P34252	453 aa		4.91	□□□□□ -1.62
LDS2	YOL047C	RPL34A	P87262	121 aa	Predicted RBP	4.91	□□□□□ -1.62
LDS2	YOL047C	YPR204W	Q08995	1032 aa		4.91	□□□□□ -1.62
LDS2	YOL047C	YML083C	Q04526	418 aa		4.9	□□□□□ -1.63
LDS2	YOL047C	NOB1	Q08444	459 aa	Known RBP	4.9	□□□□□ -1.63
LDS2	YOL047C	TIF1	P10081	395 aa	Known RBP	4.89	□□□□□ -1.63
LDS2	YOL047C	ILV3	P39522	585 aa	Known RBP	4.89	□□□□□ -1.63
LDS2	YOL047C	NMA111	P53920	997 aa		4.89	□□□□□ -1.63
LDS2	YOL047C	BRN1	P38170	754 aa		4.88	□□□□□ -1.63
LDS2	YOL047C	RPL34B	P40525	121 aa	Known RBP	4.88	□□□□□ -1.63
LDS2	YOL047C	SEN54	Q02825	467 aa	Predicted RBP	4.88	□□□□□ -1.63
LDS2	YOL047C	AMS1	P22855	1083 aa		4.87	□□□□□ -1.63
LDS2	YOL047C	SSF1	P38789	453 aa	Predicted RBP	4.87	□□□□□ -1.63
LDS2	YOL047C	YPL062W	Q02781	134 aa		4.87	□□□□□ -1.63
LDS2	YOL047C	HAT1	Q12341	374 aa		4.87	□□□□□ -1.63
LDS2	YOL047C	CHD1	P32657	1468 aa		4.87	□□□□□ -1.63
LDS2	YOL047C	CDC3	P32457	520 aa	Known RBP	4.86	□□□□□ -1.63
LDS2	YOL047C	CSN12	P47130	423 aa		4.86	□□□□□ -1.63
LDS2	YOL047C	COX6	P00427	148 aa		4.85	□□□□□ -1.63
LDS2	YOL047C	BIO2	P32451	375 aa		4.85	□□□□□ -1.63
LDS2	YOL047C	TTI1	P36097	1038 aa		4.85	□□□□□ -1.63
LDS2	YOL047C	LAM6	Q08001	693 aa		4.85	□□□□□ -1.63
LDS2	YOL047C	GYP1	Q08484	637 aa		4.85	□□□□□ -1.63
LDS2	YOL047C	TYW1	Q08960	810 aa	Known RBP	4.85	□□□□□ -1.63
LDS2	YOL047C	YTA7	P40340	1379 aa		4.85	□□□□□ -1.63
LDS2	YOL047C	KTR1	P27810	393 aa	Known RBP	4.84	□□□□□ -1.63
LDS2	YOL047C	RTG2	P32608	588 aa	Known RBP	4.84	□□□□□ -1.63
LDS2	YOL047C	DPL1	Q05567	589 aa		4.84	□□□□□ -1.63
LDS2	YOL047C	YPR015C	Q12531	247 aa		4.84	□□□□□ -1.63
LDS2	YOL047C	SPC42	P36094	363 aa		4.83	□□□□□ -1.64
LDS2	YOL047C	UBP14	P38237	781 aa	Known RBP	4.83	□□□□□ -1.64
LDS2	YOL047C	IPL1	P38991	367 aa		4.83	□□□□□ -1.64
LDS2	YOL047C	VHR2	P40041	505 aa		4.83	□□□□□ -1.64
LDS2	YOL047C	ALD4	P46367	519 aa	Known RBP	4.83	□□□□□ -1.64
LDS2	YOL047C	YNL108C	P53929	270 aa		4.83	□□□□□ -1.64
LDS2	YOL047C	SSA2	P10592	639 aa	Known RBP	4.82	□□□□□ -1.64
LDS2	YOL047C	YGR273C	P53329	174 aa		4.82	□□□□□ -1.64
LDS2	YOL047C	TOP1	P04786	769 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	HEM3	P28789	327 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	EBP2	P36049	427 aa	Known RBP	4.81	□□□□□ -1.64
LDS2	YOL047C	CAB3	P36076	571 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	YBL036C	P38197	257 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	ATG36	P46983	293 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	YJR008W	P47085	338 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	ALD2	P47771	506 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	ITT1	Q04638	464 aa		4.81	□□□□□ -1.64
LDS2	YOL047C	SLI15	P38283	698 aa		4.8	□□□□□ -1.64
LDS2	YOL047C	RAM1	P22007	431 aa		4.79	□□□□□ -1.64
LDS2	YOL047C	PUP1	P25043	261 aa		4.79	□□□□□ -1.64
LDS2	YOL047C	YDR090C	Q03193	310 aa		4.79	□□□□□ -1.64
LDS2	YOL047C	MMS22	Q06164	1454 aa		4.78	□□□□□ -1.64
LDS2	YOL047C	OCA5	P38738	679 aa		4.78	□□□□□ -1.64
LDS2	YOL047C	FAR11	P53917	953 aa		4.78	□□□□□ -1.64
LDS2	YOL047C	ENP1	P38333	483 aa	Known RBP	4.77	□□□□□ -1.65
LDS2	YOL047C	SAS4	Q04003	481 aa		4.77	□□□□□ -1.65
LDS2	YOL047C	ISU2	Q12056	156 aa		4.77	□□□□□ -1.65
LDS2	YOL047C	YEL077C	Q3E7X8	1277 aa		4.77	□□□□□ -1.65
LDS2	YOL047C	ENO1	P00924	437 aa	Known RBP	4.75	□□□□□ -1.65
LDS2	YOL047C	NUG1	P40010	520 aa	Known RBP	4.75	□□□□□ -1.65
LDS2	YOL047C	RTS3	P53289	263 aa		4.75	□□□□□ -1.65
LDS2	YOL047C	TCB3	Q03640	1545 aa	Known RBP	4.74	□□□□□ -1.65
LDS2	YOL047C	ATE1	P16639	503 aa		4.74	□□□□□ -1.65
LDS2	YOL047C	SDH2	P21801	266 aa		4.74	□□□□□ -1.65
LDS2	YOL047C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
LDS2	YOL047C	NOP53	Q12080	455 aa	Known RBP	4.74	□□□□□ -1.65
LDS2	YOL047C	YBL113C	Q7M4S9	792 aa		4.74	□□□□□ -1.65
LDS2	YOL047C	MON2	P48563	1636 aa	Predicted RBP	4.74	□□□□□ -1.65
LDS2	YOL047C	XRN1	P22147	1528 aa	Known RBP	4.73	□□□□□ -1.65
LDS2	YOL047C	CST6	P40535	587 aa		4.73	□□□□□ -1.65
LDS2	YOL047C	UFD4	P33202	1483 aa		4.73	□□□□□ -1.65
LDS2	YOL047C	ENO2	P00925	437 aa	Known RBP	4.72	□□□□□ -1.65
LDS2	YOL047C	SCJ1	P25303	377 aa		4.72	□□□□□ -1.65
LDS2	YOL047C	YDJ1	P25491	409 aa	Known RBP	4.72	□□□□□ -1.65
LDS2	YOL047C	GAR1	P28007	205 aa	Known RBP	4.72	□□□□□ -1.65
LDS2	YOL047C	SWE1	P32944	819 aa		4.72	□□□□□ -1.65
LDS2	YOL047C	KTR7	P40504	517 aa		4.72	□□□□□ -1.65
LDS2	YOL047C	PKH3	Q03306	898 aa	Predicted RBP	4.72	□□□□□ -1.65
LDS2	YOL047C	YLR326W	Q06170	240 aa	Known RBP	4.72	□□□□□ -1.65
LDS2	YOL047C	ESS1	P22696	170 aa		4.71	□□□□□ -1.66
LDS2	YOL047C	ERP5	P38819	212 aa		4.71	□□□□□ -1.66
LDS2	YOL047C	TEA1	P47988	759 aa		4.71	□□□□□ -1.66
LDS2	YOL047C	RAD59	Q12223	238 aa		4.71	□□□□□ -1.66
LDS2	YOL047C	MRF1	P30775	413 aa	Predicted RBP	4.7	□□□□□ -1.66
LDS2	YOL047C	PSE1	P32337	1089 aa	Known RBP	4.7	□□□□□ -1.66
LDS2	YOL047C	TGL4	P36165	910 aa		4.7	□□□□□ -1.66
LDS2	YOL047C	KIC1	P38692	1080 aa		4.7	□□□□□ -1.66
LDS2	YOL047C	BRE2	P43132	505 aa		4.7	□□□□□ -1.66
LDS2	YOL047C	POL32	P47110	350 aa		4.7	□□□□□ -1.66
LDS2	YOL047C	JIP5	Q06214	492 aa	Predicted RBP	4.7	□□□□□ -1.66
LDS2	YOL047C	PDR1	P12383	1068 aa		4.69	□□□□□ -1.66
LDS2	YOL047C	YJU3	P28321	313 aa		4.69	□□□□□ -1.66
LDS2	YOL047C	RNH70	P53331	553 aa		4.69	□□□□□ -1.66
LDS2	YOL047C	DOS2	P54858	310 aa		4.69	□□□□□ -1.66
LDS2	YOL047C	GCR2	Q01722	534 aa		4.69	□□□□□ -1.66
LDS2	YOL047C	ECM23	Q02710	187 aa		4.69	□□□□□ -1.66
LDS2	YOL047C	OYE2	Q03558	400 aa	Known RBP	4.69	□□□□□ -1.66
LDS2	YOL047C	RRP15	Q06511	250 aa	Predicted RBP	4.69	□□□□□ -1.66
LDS2	YOL047C	SPP41	P38904	1435 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms