RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W CSN12P47130 423 aa8.22□□□□□ -1.09
CPR8YNR028W GCD11P32481 527 aaKnown RBP8.21□□□□□ -1.1
CPR8YNR028W HST2P53686 357 aa8.21□□□□□ -1.1
CPR8YNR028W RTF1P53064 558 aa8.2□□□□□ -1.1
CPR8YNR028W YNL115CP53925 644 aa8.2□□□□□ -1.1
CPR8YNR028W GLN1P32288 370 aaKnown RBP8.19□□□□□ -1.1
CPR8YNR028W GUA1P38625 525 aaKnown RBP8.19□□□□□ -1.1
CPR8YNR028W ERF2Q06551 359 aa8.19□□□□□ -1.1
CPR8YNR028W TYW1Q08960 810 aaKnown RBP8.19□□□□□ -1.1
CPR8YNR028W PRT1P06103 763 aaKnown RBP8.18□□□□□ -1.1
CPR8YNR028W GYP1Q08484 637 aa8.18□□□□□ -1.1
CPR8YNR028W MMP1Q12372 583 aa8.18□□□□□ -1.1
CPR8YNR028W TY1A-DR4O74302 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-HP0C2I4 478 aaKnown RBP8.17□□□□□ -1.1
CPR8YNR028W TY1A-AP0CX57 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-PR1P0CX58 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-ORP0CX59 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-PR2P0CX60 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-DR5P0CX65 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-ER2P0CX66 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-GR3P0CX67 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-LR1P0CX68 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-MR2P0CX69 440 aa8.17□□□□□ -1.1
CPR8YNR028W SCJ1P25303 377 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-JR2P47099 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-DR1Q03856 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-ML1Q04706 440 aaKnown RBP8.17□□□□□ -1.1
CPR8YNR028W TY1A-BRQ12217 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-NL2Q12470 440 aa8.17□□□□□ -1.1
CPR8YNR028W TY1A-GR2Q12485 440 aa8.17□□□□□ -1.1
CPR8YNR028W SEC2P17065 759 aa8.16□□□□□ -1.1
CPR8YNR028W SLY41P22215 453 aa8.16□□□□□ -1.1
CPR8YNR028W KTR1P27810 393 aaKnown RBP8.16□□□□□ -1.1
CPR8YNR028W SSA2P10592 639 aaKnown RBP8.15□□□□□ -1.1
CPR8YNR028W SAS4Q04003 481 aa8.14□□□□□ -1.11
CPR8YNR028W ESS1P22696 170 aa8.13□□□□□ -1.11
CPR8YNR028W XDJ1P39102 459 aa8.12□□□□□ -1.11
CPR8YNR028W HPC2Q01448 625 aa8.11□□□□□ -1.11
CPR8YNR028W PKH3Q03306 898 aaPredicted RBP8.1□□□□□ -1.11
CPR8YNR028W PAT1P25644 796 aaKnown RBP8.09□□□□□ -1.11
CPR8YNR028W SPT16P32558 1035 aaKnown RBP8.09□□□□□ -1.11
CPR8YNR028W RRN7P40992 514 aa8.09□□□□□ -1.11
CPR8YNR028W YJU3P28321 313 aa8.08□□□□□ -1.12
CPR8YNR028W TUB4P53378 473 aa8.08□□□□□ -1.12
CPR8YNR028W AGE1Q04412 482 aa8.07□□□□□ -1.12
CPR8YNR028W PUS6P53294 404 aa8.06□□□□□ -1.12
CPR8YNR028W TRM1P15565 570 aaKnown RBP8.05□□□□□ -1.12
CPR8YNR028W MRF1P30775 413 aaPredicted RBP8.05□□□□□ -1.12
CPR8YNR028W BRL1P38770 471 aa8.05□□□□□ -1.12
CPR8YNR028W DMA2P53924 522 aa8.05□□□□□ -1.12
CPR8YNR028W TBF1Q02457 562 aa8.05□□□□□ -1.12
CPR8YNR028W TFB3Q03290 321 aa8.05□□□□□ -1.12
CPR8YNR028W ARG8P18544 423 aa8.04□□□□□ -1.12
CPR8YNR028W HGH1P48362 394 aaKnown RBP8.04□□□□□ -1.12
CPR8YNR028W PAC1P39946 494 aaKnown RBP8.03□□□□□ -1.12
CPR8YNR028W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
CPR8YNR028W LAM6Q08001 693 aa8.03□□□□□ -1.12
CPR8YNR028W RAD59Q12223 238 aa8.03□□□□□ -1.12
CPR8YNR028W ERG12P07277 443 aa8.01□□□□□ -1.13
CPR8YNR028W SDH2P21801 266 aa8.01□□□□□ -1.13
CPR8YNR028W RSC30P38781 883 aa8.01□□□□□ -1.13
CPR8YNR028W YDL206WQ12424 762 aa7.99□□□□□ -1.13
CPR8YNR028W PKC1P24583 1151 aa7.98□□□□□ -1.13
CPR8YNR028W KXD1P53158 218 aa7.98□□□□□ -1.13
CPR8YNR028W RPA14P50106 137 aa7.96□□□□□ -1.14
CPR8YNR028W YEL077CQ3E7X8 1277 aa7.96□□□□□ -1.14
CPR8YNR028W ALR1Q08269 859 aa7.95□□□□□ -1.14
CPR8YNR028W PDC1P06169 563 aaKnown RBP7.94□□□□□ -1.14
CPR8YNR028W YBL036CP38197 257 aa7.94□□□□□ -1.14
CPR8YNR028W YPR097WQ06839 1073 aa7.93□□□□□ -1.14
CPR8YNR028W MOD5P07884 428 aa7.92□□□□□ -1.14
CPR8YNR028W AMS1P22855 1083 aa7.92□□□□□ -1.14
CPR8YNR028W HXT10P43581 546 aa7.92□□□□□ -1.14
CPR8YNR028W DPS1P04802 557 aaKnown RBP7.91□□□□□ -1.14
CPR8YNR028W CSE4P36012 229 aa7.91□□□□□ -1.14
CPR8YNR028W CST6P40535 587 aa7.9□□□□□ -1.14
CPR8YNR028W BDP1P46678 594 aa7.9□□□□□ -1.14
CPR8YNR028W FRK1Q03002 865 aaPredicted RBP7.9□□□□□ -1.14
CPR8YNR028W MAK16P10962 306 aaPredicted RBP7.89□□□□□ -1.15
CPR8YNR028W TPD3P31383 635 aa7.89□□□□□ -1.15
CPR8YNR028W RRD1P40454 393 aaKnown RBP7.89□□□□□ -1.15
CPR8YNR028W RAS1P01119 309 aa7.88□□□□□ -1.15
CPR8YNR028W YJL007CP47080 104 aa7.88□□□□□ -1.15
CPR8YNR028W PUS5Q06244 254 aa7.84□□□□□ -1.15
CPR8YNR028W SPT5P27692 1063 aaKnown RBP7.83□□□□□ -1.16
CPR8YNR028W BIO2P32451 375 aa7.83□□□□□ -1.16
CPR8YNR028W BIM1P40013 344 aa7.83□□□□□ -1.16
CPR8YNR028W NAF1P53919 492 aaKnown RBP7.82□□□□□ -1.16
CPR8YNR028W KIP2P28743 706 aa7.8□□□□□ -1.16
CPR8YNR028W YNL108CP53929 270 aa7.8□□□□□ -1.16
CPR8YNR028W TEC1P18412 486 aa7.79□□□□□ -1.16
CPR8YNR028W YDJ1P25491 409 aaKnown RBP7.79□□□□□ -1.16
CPR8YNR028W VAC17P25591 423 aa7.79□□□□□ -1.16
CPR8YNR028W ATG32P40458 529 aa7.79□□□□□ -1.16
CPR8YNR028W FIG4P42837 879 aa7.79□□□□□ -1.16
CPR8YNR028W SYH1Q02875 849 aaKnown RBP7.79□□□□□ -1.16
CPR8YNR028W HED1Q03937 162 aa7.78□□□□□ -1.16
CPR8YNR028W IXR1P33417 597 aa7.77□□□□□ -1.17
CPR8YNR028W RPL34BP40525 121 aaKnown RBP7.77□□□□□ -1.17
CPR8YNR028W SUP45P12385 437 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms