RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C SAS10Q12136 610 aaPredicted RBP3.11□□□□□ -1.91
SFB2YNL049C LEO1P38439 464 aa3.1□□□□□ -1.91
SFB2YNL049C BBC1P47068 1157 aa3.1□□□□□ -1.91
SFB2YNL049C PSD2P53037 1138 aaKnown RBP3.1□□□□□ -1.91
SFB2YNL049C MSB4Q12317 492 aa3.1□□□□□ -1.91
SFB2YNL049C TSC11P40061 1430 aa3.1□□□□□ -1.91
SFB2YNL049C TY1B-NL2Q99337 1749 aaKnown RBP3.1□□□□□ -1.91
SFB2YNL049C AI2P03876 854 aa3.1□□□□□ -1.91
SFB2YNL049C YNL035CP53962 389 aaKnown RBP3.09□□□□□ -1.91
SFB2YNL049C SEC61P32915 480 aa3.09□□□□□ -1.91
SFB2YNL049C SAP30P38429 201 aa3.09□□□□□ -1.91
SFB2YNL049C SET4P42948 560 aa3.09□□□□□ -1.91
SFB2YNL049C ITT1Q04638 464 aa3.09□□□□□ -1.91
SFB2YNL049C TFG1P41895 735 aaPredicted RBP3.08□□□□□ -1.92
SFB2YNL049C TY3B-GQ99315 1547 aa3.08□□□□□ -1.92
SFB2YNL049C CHL1P22516 861 aaPredicted RBP3.07□□□□□ -1.92
SFB2YNL049C IQG1Q12280 1495 aa3.07□□□□□ -1.92
SFB2YNL049C ABP1P15891 592 aaKnown RBP3.06□□□□□ -1.92
SFB2YNL049C YOL036WQ08206 761 aa3.06□□□□□ -1.92
SFB2YNL049C LEU3P08638 886 aa3.05□□□□□ -1.92
SFB2YNL049C DPS1P04802 557 aaKnown RBP3.04□□□□□ -1.92
SFB2YNL049C RAM2P29703 316 aa3.04□□□□□ -1.92
SFB2YNL049C PDR10P51533 1564 aa3.04□□□□□ -1.92
SFB2YNL049C PRE3P38624 215 aa3.04□□□□□ -1.92
SFB2YNL049C XDJ1P39102 459 aa3.04□□□□□ -1.92
SFB2YNL049C ARO1P08566 1588 aaKnown RBP3.04□□□□□ -1.92
SFB2YNL049C STH1P32597 1359 aa3.03□□□□□ -1.92
SFB2YNL049C VRP1P37370 817 aa3.03□□□□□ -1.93
SFB2YNL049C RCR1P38212 213 aa3.03□□□□□ -1.93
SFB2YNL049C MRM1P25270 412 aa3.02□□□□□ -1.93
SFB2YNL049C YDL129WQ07555 291 aa3□□□□□ -1.93
SFB2YNL049C YTA7P40340 1379 aa3□□□□□ -1.93
SFB2YNL049C SET1P38827 1080 aaKnown RBP2.99□□□□□ -1.93
SFB2YNL049C VMR1P38735 1592 aa2.99□□□□□ -1.93
SFB2YNL049C SEC7P11075 2009 aaKnown RBP2.98□□□□□ -1.93
SFB2YNL049C CAT8P39113 1433 aa2.98□□□□□ -1.93
SFB2YNL049C RTG3P38165 486 aa2.97□□□□□ -1.93
SFB2YNL049C YPR148CQ06523 435 aa2.97□□□□□ -1.93
SFB2YNL049C NUP188P52593 1655 aaKnown RBP2.97□□□□□ -1.93
SFB2YNL049C MET10P39692 1035 aa2.97□□□□□ -1.93
SFB2YNL049C VPS70P47161 811 aa2.97□□□□□ -1.93
SFB2YNL049C DAN4P47179 1161 aa2.97□□□□□ -1.93
SFB2YNL049C EDE1P34216 1381 aa2.96□□□□□ -1.94
SFB2YNL049C SRC1Q03707 834 aa2.96□□□□□ -1.94
SFB2YNL049C MAK11P20484 414 aaKnown RBP2.95□□□□□ -1.94
SFB2YNL049C SPB4P25808 606 aaPredicted RBP2.95□□□□□ -1.94
SFB2YNL049C VPS29P38759 282 aa2.95□□□□□ -1.94
SFB2YNL049C RPN1P38764 993 aaKnown RBP2.95□□□□□ -1.94
SFB2YNL049C JIP4Q03361 876 aa2.94□□□□□ -1.94
SFB2YNL049C CKB1P43639 278 aa2.94□□□□□ -1.94
SFB2YNL049C DMA2P53924 522 aa2.93□□□□□ -1.94
SFB2YNL049C YBT1P32386 1661 aa2.93□□□□□ -1.94
SFB2YNL049C IFH1P39520 1085 aa2.92□□□□□ -1.94
SFB2YNL049C YDR344CQ05510 147 aa2.92□□□□□ -1.94
SFB2YNL049C USO1P25386 1790 aa2.92□□□□□ -1.94
SFB2YNL049C BNR1P40450 1375 aa2.92□□□□□ -1.94
SFB2YNL049C COQ8P27697 501 aa2.92□□□□□ -1.94
SFB2YNL049C ELP4Q02884 456 aaKnown RBP2.91□□□□□ -1.94
SFB2YNL049C IML1P47170 1584 aa2.91□□□□□ -1.94
SFB2YNL049C URN1Q06525 465 aaKnown RBP2.91□□□□□ -1.94
SFB2YNL049C YRF1-2P40105 1681 aa2.91□□□□□ -1.94
SFB2YNL049C VMA1P17255 1071 aaKnown RBP2.9□□□□□ -1.94
SFB2YNL049C DBP1P24784 617 aaKnown RBP2.9□□□□□ -1.94
SFB2YNL049C DSF2P38213 736 aa2.9□□□□□ -1.94
SFB2YNL049C STS1P38637 319 aa2.9□□□□□ -1.94
SFB2YNL049C YMR196WQ04336 1088 aa2.9□□□□□ -1.94
SFB2YNL049C EDS1P38073 919 aa2.9□□□□□ -1.95
SFB2YNL049C NUP157P40064 1391 aaKnown RBP2.9□□□□□ -1.95
SFB2YNL049C PBS2P08018 668 aa2.89□□□□□ -1.95
SFB2YNL049C SAM3Q08986 587 aa2.89□□□□□ -1.95
SFB2YNL049C YMR1P47147 688 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
SFB2YNL049C BCK1Q01389 1478 aa2.88□□□□□ -1.95
SFB2YNL049C PDR5P33302 1511 aaKnown RBP2.87□□□□□ -1.95
SFB2YNL049C PTC4P38089 393 aa2.87□□□□□ -1.95
SFB2YNL049C NOP53Q12080 455 aaKnown RBP2.87□□□□□ -1.95
SFB2YNL049C HTA1P04911 132 aaKnown RBP2.86□□□□□ -1.95
SFB2YNL049C HTA2P04912 132 aa2.86□□□□□ -1.95
SFB2YNL049C DCW1P36091 449 aa2.86□□□□□ -1.95
SFB2YNL049C YNR021WP53723 404 aaKnown RBP2.86□□□□□ -1.95
SFB2YNL049C KIN1P13185 1064 aa2.86□□□□□ -1.95
SFB2YNL049C YEL023CP39992 682 aa2.86□□□□□ -1.95
SFB2YNL049C REF2P42073 533 aaPredicted RBP2.86□□□□□ -1.95
SFB2YNL049C GYP5Q12344 894 aa2.86□□□□□ -1.95
SFB2YNL049C GLC3P32775 704 aa2.85□□□□□ -1.95
SFB2YNL049C PTC3P34221 468 aaKnown RBP2.85□□□□□ -1.95
SFB2YNL049C YAP3P38749 330 aa2.85□□□□□ -1.95
SFB2YNL049C IES2P40154 320 aa2.85□□□□□ -1.95
SFB2YNL049C MAK10Q02197 733 aa2.85□□□□□ -1.95
SFB2YNL049C MAM3Q12296 706 aa2.85□□□□□ -1.95
SFB2YNL049C CFT1Q06632 1357 aaKnown RBP2.85□□□□□ -1.95
SFB2YNL049C DIT2P21595 489 aa2.85□□□□□ -1.95
SFB2YNL049C NUP42P49686 430 aaKnown RBP2.84□□□□□ -1.95
SFB2YNL049C PML39Q03760 334 aa2.84□□□□□ -1.96
SFB2YNL049C YSP2Q06681 1438 aa2.83□□□□□ -1.96
SFB2YNL049C GEA1P47102 1408 aaPredicted RBP2.82□□□□□ -1.96
SFB2YNL049C AIM7Q12156 149 aa2.82□□□□□ -1.96
SFB2YNL049C COX6P00427 148 aa2.82□□□□□ -1.96
SFB2YNL049C GCN2P15442 1659 aa2.81□□□□□ -1.96
SFB2YNL049C RLF2Q12495 606 aa2.81□□□□□ -1.96
SFB2YNL049C VHR2P40041 505 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms