RNA–Protein interactions for RNA: YMR180C

CTL1, Transcript of RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm, yeastyeast

Gene CTL1, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTL1YMR180C TYW1Q08960 810 aaKnown RBP8.99□□□□□ -0.97
CTL1YMR180C NPL4P33755 580 aa8.98□□□□□ -0.97
CTL1YMR180C YMR196WQ04336 1088 aa8.98□□□□□ -0.97
CTL1YMR180C CSN12P47130 423 aa8.97□□□□□ -0.97
CTL1YMR180C TY1A-DR4O74302 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-HP0C2I4 478 aaKnown RBP8.96□□□□□ -0.98
CTL1YMR180C TY1A-AP0CX57 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-PR1P0CX58 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-ORP0CX59 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-PR2P0CX60 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-DR5P0CX65 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-ER2P0CX66 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-GR3P0CX67 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-LR1P0CX68 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-MR2P0CX69 440 aa8.96□□□□□ -0.98
CTL1YMR180C VRP1P37370 817 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-JR2P47099 440 aa8.96□□□□□ -0.98
CTL1YMR180C HST2P53686 357 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-DR1Q03856 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-ML1Q04706 440 aaKnown RBP8.96□□□□□ -0.98
CTL1YMR180C TY1A-BRQ12217 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-NL2Q12470 440 aa8.96□□□□□ -0.98
CTL1YMR180C TY1A-GR2Q12485 440 aa8.96□□□□□ -0.98
CTL1YMR180C SEC2P17065 759 aa8.95□□□□□ -0.98
CTL1YMR180C GCD11P32481 527 aaKnown RBP8.94□□□□□ -0.98
CTL1YMR180C YNL115CP53925 644 aa8.94□□□□□ -0.98
CTL1YMR180C MMP1Q12372 583 aa8.93□□□□□ -0.98
CTL1YMR180C GLN1P32288 370 aaKnown RBP8.92□□□□□ -0.98
CTL1YMR180C BCK2P33306 851 aa8.92□□□□□ -0.98
CTL1YMR180C RTF1P53064 558 aa8.92□□□□□ -0.98
CTL1YMR180C ESS1P22696 170 aa8.91□□□□□ -0.98
CTL1YMR180C PRT1P06103 763 aaKnown RBP8.9□□□□□ -0.98
CTL1YMR180C SLY41P22215 453 aa8.89□□□□□ -0.99
CTL1YMR180C DMA2P53924 522 aa8.88□□□□□ -0.99
CTL1YMR180C YJU3P28321 313 aa8.87□□□□□ -0.99
CTL1YMR180C SSA2P10592 639 aaKnown RBP8.86□□□□□ -0.99
CTL1YMR180C HPC2Q01448 625 aa8.86□□□□□ -0.99
CTL1YMR180C GYP1Q08484 637 aa8.86□□□□□ -0.99
CTL1YMR180C AGE1Q04412 482 aa8.85□□□□□ -0.99
CTL1YMR180C PKH3Q03306 898 aaPredicted RBP8.84□□□□□ -0.99
CTL1YMR180C TUB4P53378 473 aa8.83□□□□□ -1
CTL1YMR180C TFB3Q03290 321 aa8.83□□□□□ -1
CTL1YMR180C RRN7P40992 514 aa8.81□□□□□ -1
CTL1YMR180C SAS4Q04003 481 aa8.81□□□□□ -1
CTL1YMR180C XDJ1P39102 459 aa8.8□□□□□ -1
CTL1YMR180C PAC1P39946 494 aaKnown RBP8.8□□□□□ -1
CTL1YMR180C TRM1P15565 570 aaKnown RBP8.79□□□□□ -1
CTL1YMR180C SDH2P21801 266 aa8.79□□□□□ -1
CTL1YMR180C PKC1P24583 1151 aa8.79□□□□□ -1
CTL1YMR180C RSC30P38781 883 aa8.79□□□□□ -1
CTL1YMR180C RAD59Q12223 238 aa8.79□□□□□ -1
CTL1YMR180C PUS6P53294 404 aa8.78□□□□□ -1
CTL1YMR180C ARG8P18544 423 aa8.77□□□□□ -1.01
CTL1YMR180C SPT16P32558 1035 aaKnown RBP8.76□□□□□ -1.01
CTL1YMR180C BRL1P38770 471 aa8.75□□□□□ -1.01
CTL1YMR180C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
CTL1YMR180C LAM6Q08001 693 aa8.74□□□□□ -1.01
CTL1YMR180C PAT1P25644 796 aaKnown RBP8.73□□□□□ -1.01
CTL1YMR180C TBF1Q02457 562 aa8.72□□□□□ -1.01
CTL1YMR180C YDL206WQ12424 762 aa8.72□□□□□ -1.01
CTL1YMR180C MRF1P30775 413 aaPredicted RBP8.68□□□□□ -1.02
CTL1YMR180C PDC1P06169 563 aaKnown RBP8.67□□□□□ -1.02
CTL1YMR180C MOD5P07884 428 aa8.67□□□□□ -1.02
CTL1YMR180C HGH1P48362 394 aaKnown RBP8.67□□□□□ -1.02
CTL1YMR180C RPA14P50106 137 aa8.67□□□□□ -1.02
CTL1YMR180C ERG12P07277 443 aa8.66□□□□□ -1.02
CTL1YMR180C YBL036CP38197 257 aa8.66□□□□□ -1.02
CTL1YMR180C YPR097WQ06839 1073 aa8.66□□□□□ -1.02
CTL1YMR180C KXD1P53158 218 aa8.65□□□□□ -1.02
CTL1YMR180C CST6P40535 587 aa8.64□□□□□ -1.03
CTL1YMR180C ALR1Q08269 859 aa8.64□□□□□ -1.03
CTL1YMR180C HXT10P43581 546 aa8.63□□□□□ -1.03
CTL1YMR180C RAS1P01119 309 aa8.62□□□□□ -1.03
CTL1YMR180C MAK16P10962 306 aaPredicted RBP8.62□□□□□ -1.03
CTL1YMR180C CSE4P36012 229 aa8.62□□□□□ -1.03
CTL1YMR180C YJL007CP47080 104 aa8.62□□□□□ -1.03
CTL1YMR180C AMS1P22855 1083 aa8.61□□□□□ -1.03
CTL1YMR180C BDP1P46678 594 aa8.61□□□□□ -1.03
CTL1YMR180C TPD3P31383 635 aa8.6□□□□□ -1.03
CTL1YMR180C BIO2P32451 375 aa8.6□□□□□ -1.03
CTL1YMR180C FRK1Q03002 865 aaPredicted RBP8.6□□□□□ -1.03
CTL1YMR180C YEL077CQ3E7X8 1277 aa8.6□□□□□ -1.03
CTL1YMR180C BIM1P40013 344 aa8.59□□□□□ -1.03
CTL1YMR180C RRD1P40454 393 aaKnown RBP8.58□□□□□ -1.04
CTL1YMR180C ATG32P40458 529 aa8.57□□□□□ -1.04
CTL1YMR180C PUS5Q06244 254 aa8.57□□□□□ -1.04
CTL1YMR180C DPS1P04802 557 aaKnown RBP8.56□□□□□ -1.04
CTL1YMR180C YDJ1P25491 409 aaKnown RBP8.56□□□□□ -1.04
CTL1YMR180C YNL108CP53929 270 aa8.54□□□□□ -1.04
CTL1YMR180C FIG4P42837 879 aa8.53□□□□□ -1.04
CTL1YMR180C SUP45P12385 437 aaKnown RBP8.52□□□□□ -1.05
CTL1YMR180C CLA4P48562 842 aa8.51□□□□□ -1.05
CTL1YMR180C NAF1P53919 492 aaKnown RBP8.51□□□□□ -1.05
CTL1YMR180C TIF1P10081 395 aaKnown RBP8.5□□□□□ -1.05
CTL1YMR180C VAC17P25591 423 aa8.5□□□□□ -1.05
CTL1YMR180C SPT5P27692 1063 aaKnown RBP8.5□□□□□ -1.05
CTL1YMR180C ENO2P00925 437 aaKnown RBP8.49□□□□□ -1.05
CTL1YMR180C ITT1Q04638 464 aa8.49□□□□□ -1.05
CTL1YMR180C TEC1P18412 486 aa8.48□□□□□ -1.05
CTL1YMR180C YPR084WQ06821 456 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms