RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W SAS4Q04003 481 aa5.71□□□□□ -1.5
PKR1YMR123W GAR1P28007 205 aaKnown RBP5.7□□□□□ -1.5
PKR1YMR123W AIM7Q12156 149 aa5.7□□□□□ -1.5
PKR1YMR123W PRT1P06103 763 aaKnown RBP5.69□□□□□ -1.5
PKR1YMR123W GLC3P32775 704 aa5.69□□□□□ -1.5
PKR1YMR123W ATF2P53296 535 aa5.68□□□□□ -1.5
PKR1YMR123W TY1A-DR4O74302 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-HP0C2I4 478 aaKnown RBP5.67□□□□□ -1.5
PKR1YMR123W TY1A-AP0CX57 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-PR1P0CX58 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-ORP0CX59 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-PR2P0CX60 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-DR5P0CX65 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-ER2P0CX66 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-GR3P0CX67 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-LR1P0CX68 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-MR2P0CX69 440 aa5.67□□□□□ -1.5
PKR1YMR123W SIT4P20604 311 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-JR2P47099 440 aa5.67□□□□□ -1.5
PKR1YMR123W RTF1P53064 558 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-DR1Q03856 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-ML1Q04706 440 aaKnown RBP5.67□□□□□ -1.5
PKR1YMR123W TY1A-BRQ12217 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-NL2Q12470 440 aa5.67□□□□□ -1.5
PKR1YMR123W TY1A-GR2Q12485 440 aa5.67□□□□□ -1.5
PKR1YMR123W GCD11P32481 527 aaKnown RBP5.66□□□□□ -1.5
PKR1YMR123W NIS1P53939 407 aa5.66□□□□□ -1.5
PKR1YMR123W SEC2P17065 759 aa5.65□□□□□ -1.5
PKR1YMR123W RPN1P38764 993 aaKnown RBP5.65□□□□□ -1.5
PKR1YMR123W KEX2P13134 814 aa5.64□□□□□ -1.51
PKR1YMR123W YNL115CP53925 644 aa5.64□□□□□ -1.51
PKR1YMR123W GBP2P25555 427 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
PKR1YMR123W AIR1P40507 360 aaKnown RBP5.63□□□□□ -1.51
PKR1YMR123W ERF2Q06551 359 aa5.63□□□□□ -1.51
PKR1YMR123W YEL077CQ3E7X8 1277 aa5.63□□□□□ -1.51
PKR1YMR123W MRF1P30775 413 aaPredicted RBP5.62□□□□□ -1.51
PKR1YMR123W BRE2P43132 505 aa5.62□□□□□ -1.51
PKR1YMR123W FPK1P53739 893 aa5.62□□□□□ -1.51
PKR1YMR123W HST2P53686 357 aa5.61□□□□□ -1.51
PKR1YMR123W YMR196WQ04336 1088 aa5.61□□□□□ -1.51
PKR1YMR123W CLA4P48562 842 aa5.6□□□□□ -1.51
PKR1YMR123W PAT1P25644 796 aaKnown RBP5.59□□□□□ -1.51
PKR1YMR123W SPT16P32558 1035 aaKnown RBP5.59□□□□□ -1.51
PKR1YMR123W RRN7P40992 514 aa5.59□□□□□ -1.51
PKR1YMR123W AGE1Q04412 482 aa5.59□□□□□ -1.51
PKR1YMR123W KIN1P13185 1064 aa5.58□□□□□ -1.52
PKR1YMR123W ERG12P07277 443 aa5.57□□□□□ -1.52
PKR1YMR123W TUB4P53378 473 aa5.57□□□□□ -1.52
PKR1YMR123W GLN1P32288 370 aaKnown RBP5.56□□□□□ -1.52
PKR1YMR123W MMP1Q12372 583 aa5.56□□□□□ -1.52
PKR1YMR123W SLY41P22215 453 aa5.55□□□□□ -1.52
PKR1YMR123W PAC1P39946 494 aaKnown RBP5.55□□□□□ -1.52
PKR1YMR123W SCJ1P25303 377 aa5.54□□□□□ -1.52
PKR1YMR123W CST6P40535 587 aa5.53□□□□□ -1.52
PKR1YMR123W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PKR1YMR123W CSN12P47130 423 aa5.53□□□□□ -1.52
PKR1YMR123W MOD5P07884 428 aa5.52□□□□□ -1.53
PKR1YMR123W KTR1P27810 393 aaKnown RBP5.52□□□□□ -1.53
PKR1YMR123W PUS6P53294 404 aa5.52□□□□□ -1.53
PKR1YMR123W ESS1P22696 170 aa5.51□□□□□ -1.53
PKR1YMR123W GCR2Q01722 534 aa5.51□□□□□ -1.53
PKR1YMR123W LAM6Q08001 693 aa5.51□□□□□ -1.53
PKR1YMR123W TYW1Q08960 810 aaKnown RBP5.51□□□□□ -1.53
PKR1YMR123W SSA2P10592 639 aaKnown RBP5.5□□□□□ -1.53
PKR1YMR123W TRM1P15565 570 aaKnown RBP5.5□□□□□ -1.53
PKR1YMR123W LEO1P38439 464 aa5.5□□□□□ -1.53
PKR1YMR123W YJU3P28321 313 aa5.49□□□□□ -1.53
PKR1YMR123W TPD3P31383 635 aa5.49□□□□□ -1.53
PKR1YMR123W BDP1P46678 594 aa5.49□□□□□ -1.53
PKR1YMR123W RPA14P50106 137 aa5.49□□□□□ -1.53
PKR1YMR123W TBF1Q02457 562 aa5.49□□□□□ -1.53
PKR1YMR123W RSC30P38781 883 aa5.48□□□□□ -1.53
PKR1YMR123W KXD1P53158 218 aa5.48□□□□□ -1.53
PKR1YMR123W PKH3Q03306 898 aaPredicted RBP5.48□□□□□ -1.53
PKR1YMR123W PDC1P06169 563 aaKnown RBP5.47□□□□□ -1.53
PKR1YMR123W MET22P32179 357 aa5.47□□□□□ -1.53
PKR1YMR123W GUA1P38625 525 aaKnown RBP5.47□□□□□ -1.53
PKR1YMR123W YPR097WQ06839 1073 aa5.47□□□□□ -1.53
PKR1YMR123W YDL206WQ12424 762 aa5.47□□□□□ -1.53
PKR1YMR123W HXT10P43581 546 aa5.46□□□□□ -1.54
PKR1YMR123W FRK1Q03002 865 aaPredicted RBP5.46□□□□□ -1.54
PKR1YMR123W RRD1P40454 393 aaKnown RBP5.45□□□□□ -1.54
PKR1YMR123W HPC2Q01448 625 aa5.45□□□□□ -1.54
PKR1YMR123W ALR1Q08269 859 aa5.45□□□□□ -1.54
PKR1YMR123W ARG8P18544 423 aa5.44□□□□□ -1.54
PKR1YMR123W RAD59Q12223 238 aa5.44□□□□□ -1.54
PKR1YMR123W HED1Q03937 162 aa5.43□□□□□ -1.54
PKR1YMR123W CDC4P07834 779 aa5.4□□□□□ -1.54
PKR1YMR123W PUS5Q06244 254 aa5.4□□□□□ -1.54
PKR1YMR123W ENV9Q08651 330 aa5.4□□□□□ -1.54
PKR1YMR123W BRL1P38770 471 aa5.38□□□□□ -1.55
PKR1YMR123W SYH1Q02875 849 aaKnown RBP5.38□□□□□ -1.55
PKR1YMR123W MAK16P10962 306 aaPredicted RBP5.37□□□□□ -1.55
PKR1YMR123W TFB3Q03290 321 aa5.37□□□□□ -1.55
PKR1YMR123W VAC17P25591 423 aa5.36□□□□□ -1.55
PKR1YMR123W CSE4P36012 229 aa5.36□□□□□ -1.55
PKR1YMR123W YDR444WQ04093 687 aa5.36□□□□□ -1.55
PKR1YMR123W YDL176WQ12027 708 aa5.36□□□□□ -1.55
PKR1YMR123W IXR1P33417 597 aa5.35□□□□□ -1.55
PKR1YMR123W MET32Q12041 191 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms