RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W TY1A-ORP0CX59 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-PR2P0CX60 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-DR5P0CX65 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-ER2P0CX66 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-GR3P0CX67 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-LR1P0CX68 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-MR2P0CX69 440 aa8.94□□□□□ -0.98
CSM3YMR048W SEC2P17065 759 aa8.94□□□□□ -0.98
CSM3YMR048W DIT2P21595 489 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-JR2P47099 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-DR1Q03856 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-ML1Q04706 440 aaKnown RBP8.94□□□□□ -0.98
CSM3YMR048W TY1A-BRQ12217 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-NL2Q12470 440 aa8.94□□□□□ -0.98
CSM3YMR048W TY1A-GR2Q12485 440 aa8.94□□□□□ -0.98
CSM3YMR048W TEA1P47988 759 aa8.92□□□□□ -0.98
CSM3YMR048W ERG12P07277 443 aa8.91□□□□□ -0.98
CSM3YMR048W SPT16P32558 1035 aaKnown RBP8.9□□□□□ -0.98
CSM3YMR048W PAT1P25644 796 aaKnown RBP8.89□□□□□ -0.99
CSM3YMR048W KEX2P13134 814 aa8.88□□□□□ -0.99
CSM3YMR048W RTF1P53064 558 aa8.88□□□□□ -0.99
CSM3YMR048W SRC1Q03707 834 aa8.88□□□□□ -0.99
CSM3YMR048W SIT4P20604 311 aa8.86□□□□□ -0.99
CSM3YMR048W ERF2Q06551 359 aa8.85□□□□□ -0.99
CSM3YMR048W RRN7P40992 514 aa8.84□□□□□ -0.99
CSM3YMR048W YNR021WP53723 404 aaKnown RBP8.83□□□□□ -1
CSM3YMR048W YNL115CP53925 644 aa8.83□□□□□ -1
CSM3YMR048W NIS1P53939 407 aa8.81□□□□□ -1
CSM3YMR048W ATF2P53296 535 aa8.8□□□□□ -1
CSM3YMR048W TRK1P12685 1235 aa8.77□□□□□ -1.01
CSM3YMR048W CST6P40535 587 aa8.77□□□□□ -1.01
CSM3YMR048W LAM6Q08001 693 aa8.77□□□□□ -1.01
CSM3YMR048W TUB4P53378 473 aa8.76□□□□□ -1.01
CSM3YMR048W FPK1P53739 893 aa8.76□□□□□ -1.01
CSM3YMR048W YMR196WQ04336 1088 aa8.76□□□□□ -1.01
CSM3YMR048W AGE1Q04412 482 aa8.76□□□□□ -1.01
CSM3YMR048W PAC1P39946 494 aaKnown RBP8.74□□□□□ -1.01
CSM3YMR048W BDP1P46678 594 aa8.73□□□□□ -1.01
CSM3YMR048W GLC3P32775 704 aa8.72□□□□□ -1.01
CSM3YMR048W FRK1Q03002 865 aaPredicted RBP8.72□□□□□ -1.01
CSM3YMR048W AIM7Q12156 149 aa8.72□□□□□ -1.01
CSM3YMR048W SLY41P22215 453 aa8.71□□□□□ -1.02
CSM3YMR048W HST2P53686 357 aa8.71□□□□□ -1.02
CSM3YMR048W MOD5P07884 428 aa8.7□□□□□ -1.02
CSM3YMR048W KXD1P53158 218 aa8.67□□□□□ -1.02
CSM3YMR048W HED1Q03937 162 aa8.67□□□□□ -1.02
CSM3YMR048W LEU3P08638 886 aa8.66□□□□□ -1.02
CSM3YMR048W TPD3P31383 635 aa8.65□□□□□ -1.02
CSM3YMR048W GLN1P32288 370 aaKnown RBP8.65□□□□□ -1.02
CSM3YMR048W PUS6P53294 404 aa8.65□□□□□ -1.02
CSM3YMR048W MMP1Q12372 583 aa8.65□□□□□ -1.02
CSM3YMR048W CDC4P07834 779 aa8.64□□□□□ -1.03
CSM3YMR048W CLA4P48562 842 aa8.64□□□□□ -1.03
CSM3YMR048W AIR1P40507 360 aaKnown RBP8.63□□□□□ -1.03
CSM3YMR048W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
CSM3YMR048W TBF1Q02457 562 aa8.62□□□□□ -1.03
CSM3YMR048W SCJ1P25303 377 aa8.61□□□□□ -1.03
CSM3YMR048W HXT10P43581 546 aa8.61□□□□□ -1.03
CSM3YMR048W PDC1P06169 563 aaKnown RBP8.59□□□□□ -1.03
CSM3YMR048W RPA14P50106 137 aa8.59□□□□□ -1.03
CSM3YMR048W RRD1P40454 393 aaKnown RBP8.58□□□□□ -1.04
CSM3YMR048W GCR2Q01722 534 aa8.58□□□□□ -1.04
CSM3YMR048W ALR1Q08269 859 aa8.58□□□□□ -1.04
CSM3YMR048W TRM1P15565 570 aaKnown RBP8.57□□□□□ -1.04
CSM3YMR048W YPR097WQ06839 1073 aa8.57□□□□□ -1.04
CSM3YMR048W ESS1P22696 170 aa8.56□□□□□ -1.04
CSM3YMR048W BRE2P43132 505 aa8.56□□□□□ -1.04
CSM3YMR048W PUS5Q06244 254 aa8.56□□□□□ -1.04
CSM3YMR048W YDL206WQ12424 762 aa8.56□□□□□ -1.04
CSM3YMR048W CSN12P47130 423 aa8.55□□□□□ -1.04
CSM3YMR048W TYW1Q08960 810 aaKnown RBP8.54□□□□□ -1.04
CSM3YMR048W RPN1P38764 993 aaKnown RBP8.53□□□□□ -1.04
CSM3YMR048W KTR1P27810 393 aaKnown RBP8.52□□□□□ -1.05
CSM3YMR048W SYH1Q02875 849 aaKnown RBP8.52□□□□□ -1.05
CSM3YMR048W YJU3P28321 313 aa8.51□□□□□ -1.05
CSM3YMR048W KIN1P13185 1064 aa8.5□□□□□ -1.05
CSM3YMR048W RSC30P38781 883 aa8.5□□□□□ -1.05
CSM3YMR048W MET32Q12041 191 aa8.5□□□□□ -1.05
CSM3YMR048W AFT1P22149 690 aa8.49□□□□□ -1.05
CSM3YMR048W ASH1P34233 588 aa8.48□□□□□ -1.05
CSM3YMR048W PKH3Q03306 898 aaPredicted RBP8.48□□□□□ -1.05
CSM3YMR048W HST3P53687 447 aa8.47□□□□□ -1.05
CSM3YMR048W SSA2P10592 639 aaKnown RBP8.45□□□□□ -1.06
CSM3YMR048W KIP2P28743 706 aa8.45□□□□□ -1.06
CSM3YMR048W ARG8P18544 423 aa8.44□□□□□ -1.06
CSM3YMR048W IXR1P33417 597 aa8.42□□□□□ -1.06
CSM3YMR048W VAC17P25591 423 aa8.4□□□□□ -1.06
CSM3YMR048W RAD59Q12223 238 aa8.4□□□□□ -1.06
CSM3YMR048W MSB3P48566 633 aaPredicted RBP8.39□□□□□ -1.07
CSM3YMR048W MRT4P33201 236 aaKnown RBP8.38□□□□□ -1.07
CSM3YMR048W RTT106P40161 455 aa8.38□□□□□ -1.07
CSM3YMR048W MET22P32179 357 aa8.35□□□□□ -1.07
CSM3YMR048W YJR115WP47152 169 aa8.35□□□□□ -1.07
CSM3YMR048W ENV9Q08651 330 aa8.35□□□□□ -1.07
CSM3YMR048W UGA3P26370 528 aa8.34□□□□□ -1.07
CSM3YMR048W GUA1P38625 525 aaKnown RBP8.33□□□□□ -1.08
CSM3YMR048W GAR1P28007 205 aaKnown RBP8.31□□□□□ -1.08
CSM3YMR048W RGA1P39083 1007 aa8.3□□□□□ -1.08
CSM3YMR048W FIG4P42837 879 aa8.3□□□□□ -1.08
CSM3YMR048W HPC2Q01448 625 aa8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms