RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C TY1A-ER2P0CX66 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-GR3P0CX67 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-LR1P0CX68 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-MR2P0CX69 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-JR2P47099 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-DR1Q03856 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-ML1Q04706 440 aaKnown RBP4.77□□□□□ -1.65
SOK2YMR016C YPR109WQ06104 294 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-BRQ12217 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-NL2Q12470 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-GR2Q12485 440 aa4.77□□□□□ -1.65
SOK2YMR016C RGR1P19263 1082 aa4.76□□□□□ -1.65
SOK2YMR016C SEC2P17065 759 aa4.76□□□□□ -1.65
SOK2YMR016C CKB1P43639 278 aa4.76□□□□□ -1.65
SOK2YMR016C CDC4P07834 779 aa4.75□□□□□ -1.65
SOK2YMR016C YPL062WQ02781 134 aa4.75□□□□□ -1.65
SOK2YMR016C RRN7P40992 514 aa4.75□□□□□ -1.65
SOK2YMR016C AIR1P40507 360 aaKnown RBP4.74□□□□□ -1.65
SOK2YMR016C FRK1Q03002 865 aaPredicted RBP4.74□□□□□ -1.65
SOK2YMR016C GBP2P25555 427 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
SOK2YMR016C BDP1P46678 594 aa4.72□□□□□ -1.65
SOK2YMR016C HED1Q03937 162 aa4.72□□□□□ -1.65
SOK2YMR016C CLB5P30283 435 aa4.72□□□□□ -1.65
SOK2YMR016C PSE1P32337 1089 aaKnown RBP4.72□□□□□ -1.65
SOK2YMR016C CLA4P48562 842 aa4.71□□□□□ -1.65
SOK2YMR016C PBS2P08018 668 aa4.7□□□□□ -1.66
SOK2YMR016C GAR1P28007 205 aaKnown RBP4.7□□□□□ -1.66
SOK2YMR016C KEX2P13134 814 aa4.69□□□□□ -1.66
SOK2YMR016C RTF1P53064 558 aa4.67□□□□□ -1.66
SOK2YMR016C ENV9Q08651 330 aa4.66□□□□□ -1.66
SOK2YMR016C MAM3Q12296 706 aa4.66□□□□□ -1.66
SOK2YMR016C ERF2Q06551 359 aa4.65□□□□□ -1.66
SOK2YMR016C MOD5P07884 428 aa4.64□□□□□ -1.67
SOK2YMR016C MET22P32179 357 aa4.64□□□□□ -1.67
SOK2YMR016C PAC1P39946 494 aaKnown RBP4.64□□□□□ -1.67
SOK2YMR016C HST3P53687 447 aa4.64□□□□□ -1.67
SOK2YMR016C DMA1P38823 416 aa4.63□□□□□ -1.67
SOK2YMR016C AFT1P22149 690 aa4.63□□□□□ -1.67
SOK2YMR016C TUB4P53378 473 aa4.63□□□□□ -1.67
SOK2YMR016C YNL115CP53925 644 aa4.63□□□□□ -1.67
SOK2YMR016C ASH1P34233 588 aa4.62□□□□□ -1.67
SOK2YMR016C DSF2P38213 736 aa4.62□□□□□ -1.67
SOK2YMR016C YDR444WQ04093 687 aa4.62□□□□□ -1.67
SOK2YMR016C AGE1Q04412 482 aa4.62□□□□□ -1.67
SOK2YMR016C MET32Q12041 191 aa4.61□□□□□ -1.67
SOK2YMR016C TEA1P47988 759 aa4.6□□□□□ -1.67
SOK2YMR016C KXD1P53158 218 aa4.6□□□□□ -1.67
SOK2YMR016C SIT4P20604 311 aa4.6□□□□□ -1.67
SOK2YMR016C IES2P40154 320 aa4.59□□□□□ -1.67
SOK2YMR016C LCB5Q06147 687 aaKnown RBP4.59□□□□□ -1.67
SOK2YMR016C TPD3P31383 635 aa4.58□□□□□ -1.68
SOK2YMR016C PUS5Q06244 254 aa4.58□□□□□ -1.68
SOK2YMR016C RQC2Q12532 1038 aaKnown RBP4.57□□□□□ -1.68
SOK2YMR016C SAS10Q12136 610 aaPredicted RBP4.57□□□□□ -1.68
SOK2YMR016C SYH1Q02875 849 aaKnown RBP4.56□□□□□ -1.68
SOK2YMR016C HXT10P43581 546 aa4.56□□□□□ -1.68
SOK2YMR016C RRD1P40454 393 aaKnown RBP4.55□□□□□ -1.68
SOK2YMR016C YJR115WP47152 169 aa4.55□□□□□ -1.68
SOK2YMR016C MSB3P48566 633 aaPredicted RBP4.55□□□□□ -1.68
SOK2YMR016C NUP42P49686 430 aaKnown RBP4.55□□□□□ -1.68
SOK2YMR016C NIS1P53939 407 aa4.55□□□□□ -1.68
SOK2YMR016C YMR196WQ04336 1088 aa4.54□□□□□ -1.68
SOK2YMR016C SPB4P25808 606 aaPredicted RBP4.53□□□□□ -1.68
SOK2YMR016C PDC1P06169 563 aaKnown RBP4.53□□□□□ -1.68
SOK2YMR016C SLY41P22215 453 aa4.53□□□□□ -1.68
SOK2YMR016C ALR1Q08269 859 aa4.53□□□□□ -1.68
SOK2YMR016C RTT106P40161 455 aa4.52□□□□□ -1.69
SOK2YMR016C RPA14P50106 137 aa4.51□□□□□ -1.69
SOK2YMR016C TBF1Q02457 562 aa4.51□□□□□ -1.69
SOK2YMR016C UGA3P26370 528 aa4.51□□□□□ -1.69
SOK2YMR016C PUS6P53294 404 aa4.51□□□□□ -1.69
SOK2YMR016C FPK1P53739 893 aa4.51□□□□□ -1.69
SOK2YMR016C YLR346CQ06139 101 aa4.51□□□□□ -1.69
SOK2YMR016C YDL176WQ12027 708 aa4.51□□□□□ -1.69
SOK2YMR016C KIP2P28743 706 aa4.5□□□□□ -1.69
SOK2YMR016C DIT2P21595 489 aa4.49□□□□□ -1.69
SOK2YMR016C YPR097WQ06839 1073 aa4.49□□□□□ -1.69
SOK2YMR016C SRF1Q12516 437 aa4.49□□□□□ -1.69
SOK2YMR016C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SOK2YMR016C YDL206WQ12424 762 aa4.48□□□□□ -1.69
SOK2YMR016C IXR1P33417 597 aa4.47□□□□□ -1.69
SOK2YMR016C PTK2P47116 818 aaKnown RBP4.47□□□□□ -1.69
SOK2YMR016C HST2P53686 357 aa4.47□□□□□ -1.69
SOK2YMR016C MRT4P33201 236 aaKnown RBP4.46□□□□□ -1.7
SOK2YMR016C ACO2P39533 789 aa4.46□□□□□ -1.7
SOK2YMR016C TRM1P15565 570 aaKnown RBP4.45□□□□□ -1.7
SOK2YMR016C NUP85P46673 744 aa4.45□□□□□ -1.7
SOK2YMR016C OPT2Q06593 877 aa4.45□□□□□ -1.7
SOK2YMR016C TYW1Q08960 810 aaKnown RBP4.45□□□□□ -1.7
SOK2YMR016C GLY1P37303 387 aaKnown RBP4.44□□□□□ -1.7
SOK2YMR016C CAF120P53836 1060 aa4.44□□□□□ -1.7
SOK2YMR016C MMP1Q12372 583 aa4.44□□□□□ -1.7
SOK2YMR016C ATF2P53296 535 aa4.43□□□□□ -1.7
SOK2YMR016C GLN1P32288 370 aaKnown RBP4.43□□□□□ -1.7
SOK2YMR016C SCW11P53189 542 aa4.42□□□□□ -1.7
SOK2YMR016C MIP1P15801 1254 aa4.41□□□□□ -1.7
SOK2YMR016C SCJ1P25303 377 aa4.41□□□□□ -1.7
SOK2YMR016C ARG82P07250 355 aa4.4□□□□□ -1.7
SOK2YMR016C YGR035CP53222 116 aa4.4□□□□□ -1.71
SOK2YMR016C VAC17P25591 423 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 271.5 ms