RNA–Protein interactions for RNA: YML104C

MDM1, Transcript of Intermediate filament protein, yeast

Gene MDM1, Length 3,384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDM1	YML104C	IPL1	P38991	367 aa		4.3	□□□□□ -1.72
MDM1	YML104C	MRPL32	P25348	183 aa		4.28	□□□□□ -1.72
MDM1	YML104C	RIM15	P43565	1770 aa		4.28	□□□□□ -1.72
MDM1	YML104C	ADE6	P38972	1358 aa	Known RBP	4.28	□□□□□ -1.72
MDM1	YML104C	RPG1	P38249	964 aa	Known RBP	4.27	□□□□□ -1.73
MDM1	YML104C	YAP3	P38749	330 aa		4.25	□□□□□ -1.73
MDM1	YML104C	PRP43	P53131	767 aa	Known RBP	4.25	□□□□□ -1.73
MDM1	YML104C	YGL015C	P33199	130 aa		4.24	□□□□□ -1.73
MDM1	YML104C	ESL2	P36168	1195 aa		4.24	□□□□□ -1.73
MDM1	YML104C	CKB1	P43639	278 aa		4.23	□□□□□ -1.73
MDM1	YML104C	RPP0	P05317	312 aa	Known RBP	4.22	□□□□□ -1.73
MDM1	YML104C	POL5	P39985	1022 aa	Known RBP	4.22	□□□□□ -1.73
MDM1	YML104C	ALD4	P46367	519 aa	Known RBP	4.22	□□□□□ -1.73
MDM1	YML104C	ENP1	P38333	483 aa	Known RBP	4.21	□□□□□ -1.74
MDM1	YML104C	DMA1	P38823	416 aa		4.2	□□□□□ -1.74
MDM1	YML104C	PAF1	P38351	445 aa		4.2	□□□□□ -1.74
MDM1	YML104C	SIR4	P11978	1358 aa		4.2	□□□□□ -1.74
MDM1	YML104C	RAD9	P14737	1309 aa		4.19	□□□□□ -1.74
MDM1	YML104C	FKH1	P40466	484 aa		4.19	□□□□□ -1.74
MDM1	YML104C	TYS1	P36421	394 aa	Known RBP	4.18	□□□□□ -1.74
MDM1	YML104C	NOP7	P53261	605 aa	Known RBP	4.18	□□□□□ -1.74
MDM1	YML104C	EDE1	P34216	1381 aa		4.17	□□□□□ -1.74
MDM1	YML104C	AUS1	Q08409	1394 aa		4.17	□□□□□ -1.74
MDM1	YML104C	SPT7	P35177	1332 aa		4.17	□□□□□ -1.74
MDM1	YML104C	SIS1	P25294	352 aa	Known RBP	4.16	□□□□□ -1.74
MDM1	YML104C	MAK10	Q02197	733 aa		4.16	□□□□□ -1.74
MDM1	YML104C	LYS2	P07702	1392 aa		4.15	□□□□□ -1.74
MDM1	YML104C	TAP42	Q04372	366 aa		4.15	□□□□□ -1.74
MDM1	YML104C	BUD31	P25337	157 aa	Predicted RBP	4.15	□□□□□ -1.75
MDM1	YML104C	FIG2	P25653	1609 aa		4.14	□□□□□ -1.75
MDM1	YML104C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
MDM1	YML104C	PRS1	P32895	427 aa	Known RBP	4.13	□□□□□ -1.75
MDM1	YML104C	YMR196W	Q04336	1088 aa		4.13	□□□□□ -1.75
MDM1	YML104C	DUR1,2	P32528	1835 aa	Known RBP	4.12	□□□□□ -1.75
MDM1	YML104C	YFR016C	P43597	1233 aa	Known RBP	4.12	□□□□□ -1.75
MDM1	YML104C	YRB30	P53107	440 aa	Predicted RBP	4.11	□□□□□ -1.75
MDM1	YML104C	RPO41	P13433	1351 aa	Known RBP	4.11	□□□□□ -1.75
MDM1	YML104C	CPS1	P27614	576 aa		4.11	□□□□□ -1.75
MDM1	YML104C	YEF3	P16521	1044 aa	Known RBP	4.1	□□□□□ -1.75
MDM1	YML104C	KRE5	P22023	1365 aa		4.09	□□□□□ -1.75
MDM1	YML104C	YNR029C	P53729	429 aa	Known RBP	4.09	□□□□□ -1.75
MDM1	YML104C	SPE2	P21182	396 aa		4.09	□□□□□ -1.76
MDM1	YML104C	PTP3	P40048	928 aa		4.09	□□□□□ -1.76
MDM1	YML104C	HKR1	P41809	1802 aa		4.08	□□□□□ -1.76
MDM1	YML104C	MTR4	P47047	1073 aa	Known RBP	4.06	□□□□□ -1.76
MDM1	YML104C	PDS5	Q04264	1277 aa		4.06	□□□□□ -1.76
MDM1	YML104C	GRX4	P32642	244 aa		4.05	□□□□□ -1.76
MDM1	YML104C	TAF5	P38129	798 aa		4.05	□□□□□ -1.76
MDM1	YML104C	NAP1	P25293	417 aa	Known RBP	4.05	□□□□□ -1.76
MDM1	YML104C	KIP3	P53086	805 aa	Known RBP	4.05	□□□□□ -1.76
MDM1	YML104C	PPH3	P32345	308 aa		4.04	□□□□□ -1.76
MDM1	YML104C	FAS2	P19097	1887 aa	Known RBP	4.04	□□□□□ -1.76
MDM1	YML104C	CTF4	Q01454	927 aa		4.03	□□□□□ -1.76
MDM1	YML104C	TAF8	Q03750	510 aa		4.03	□□□□□ -1.76
MDM1	YML104C	YIR014W	P40570	242 aa		4.03	□□□□□ -1.76
MDM1	YML104C	RRP46	P53256	223 aa	Predicted RBP	4.03	□□□□□ -1.76
MDM1	YML104C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
MDM1	YML104C	RSF2	P46974	1380 aa		4.02	□□□□□ -1.77
MDM1	YML104C	CDC45	Q08032	650 aa		4.02	□□□□□ -1.77
MDM1	YML104C	HEF3	P53978	1044 aa	Known RBP	4.02	□□□□□ -1.77
MDM1	YML104C	CAB1	Q04430	367 aa		4.02	□□□□□ -1.77
MDM1	YML104C	YJR008W	P47085	338 aa		4.01	□□□□□ -1.77
MDM1	YML104C	NST1	P53935	1240 aa		4.01	□□□□□ -1.77
MDM1	YML104C	VPS27	P40343	622 aa	Known RBP	4	□□□□□ -1.77
MDM1	YML104C	LEU2	P04173	364 aa	Predicted RBP	4	□□□□□ -1.77
MDM1	YML104C	PSD2	P53037	1138 aa	Known RBP	4	□□□□□ -1.77
MDM1	YML104C	ABP1	P15891	592 aa	Known RBP	4	□□□□□ -1.77
MDM1	YML104C	RTG3	P38165	486 aa		4	□□□□□ -1.77
MDM1	YML104C	ROM2	P51862	1356 aa	Known RBP	3.99	□□□□□ -1.77
MDM1	YML104C	TRK1	P12685	1235 aa		3.98	□□□□□ -1.77
MDM1	YML104C	PDI1	P17967	522 aa	Known RBP	3.98	□□□□□ -1.77
MDM1	YML104C	CHZ1	P40019	153 aa	Predicted RBP	3.97	□□□□□ -1.77
MDM1	YML104C	HGH1	P48362	394 aa	Known RBP	3.97	□□□□□ -1.77
MDM1	YML104C	YNL050C	P53952	270 aa		3.97	□□□□□ -1.77
MDM1	YML104C	YAH1	Q12184	172 aa	Known RBP	3.97	□□□□□ -1.77
MDM1	YML104C	MRX12	P47084	519 aa		3.96	□□□□□ -1.78
MDM1	YML104C	RIA1	P53893	1110 aa		3.96	□□□□□ -1.78
MDM1	YML104C	PRD1	P25375	712 aa		3.96	□□□□□ -1.78
MDM1	YML104C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
MDM1	YML104C	RPL17A	P05740	184 aa	Known RBP	3.95	□□□□□ -1.78
MDM1	YML104C	RPL17B	P46990	184 aa	Known RBP	3.95	□□□□□ -1.78
MDM1	YML104C	MIF2	P35201	549 aa		3.94	□□□□□ -1.78
MDM1	YML104C	MAM1	P40065	302 aa		3.94	□□□□□ -1.78
MDM1	YML104C	RCM1	P53972	490 aa		3.94	□□□□□ -1.78
MDM1	YML104C	SUI2	P20459	304 aa	Known RBP	3.94	□□□□□ -1.78
MDM1	YML104C	THI22	Q06490	572 aa		3.94	□□□□□ -1.78
MDM1	YML104C	RTF1	P53064	558 aa		3.93	□□□□□ -1.78
MDM1	YML104C	SLM3	Q12093	417 aa		3.93	□□□□□ -1.78
MDM1	YML104C	SET1	P38827	1080 aa	Known RBP	3.93	□□□□□ -1.78
MDM1	YML104C	THI12	P42883	340 aa		3.93	□□□□□ -1.78
MDM1	YML104C	THI5	P43534	340 aa		3.93	□□□□□ -1.78
MDM1	YML104C	THI11	P47183	340 aa		3.93	□□□□□ -1.78
MDM1	YML104C	THI13	Q07748	340 aa		3.93	□□□□□ -1.78
MDM1	YML104C	NUP145	P49687	1317 aa		3.92	□□□□□ -1.78
MDM1	YML104C	NOP2	P40991	618 aa	Known RBP	3.92	□□□□□ -1.78
MDM1	YML104C	YDR306C	Q06640	478 aa		3.92	□□□□□ -1.78
MDM1	YML104C	HIM1	Q06674	414 aa		3.92	□□□□□ -1.78
MDM1	YML104C	RVB2	Q12464	471 aa	Known RBP	3.92	□□□□□ -1.78
MDM1	YML104C	NTH2	P35172	780 aa		3.91	□□□□□ -1.78
MDM1	YML104C	UBP9	P39967	754 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms