RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W TY1A-PR2P0CX60 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-DR5P0CX65 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-ER2P0CX66 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-GR3P0CX67 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-LR1P0CX68 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-MR2P0CX69 440 aa6.16□□□□□ -1.42
PDP3YLR455W SEC2P17065 759 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-JR2P47099 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-DR1Q03856 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-ML1Q04706 440 aaKnown RBP6.16□□□□□ -1.42
PDP3YLR455W TY1A-BRQ12217 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-NL2Q12470 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-GR2Q12485 440 aa6.16□□□□□ -1.42
PDP3YLR455W YEL077CQ3E7X8 1277 aa6.15□□□□□ -1.42
PDP3YLR455W CLB5P30283 435 aa6.14□□□□□ -1.43
PDP3YLR455W DIT2P21595 489 aa6.13□□□□□ -1.43
PDP3YLR455W ERG12P07277 443 aa6.12□□□□□ -1.43
PDP3YLR455W KEX2P13134 814 aa6.12□□□□□ -1.43
PDP3YLR455W SPT16P32558 1035 aaKnown RBP6.12□□□□□ -1.43
PDP3YLR455W ERF2Q06551 359 aa6.11□□□□□ -1.43
PDP3YLR455W RRN7P40992 514 aa6.1□□□□□ -1.43
PDP3YLR455W TEA1P47988 759 aa6.1□□□□□ -1.43
PDP3YLR455W PAT1P25644 796 aaKnown RBP6.09□□□□□ -1.43
PDP3YLR455W CST6P40535 587 aa6.07□□□□□ -1.44
PDP3YLR455W TRK1P12685 1235 aa6.06□□□□□ -1.44
PDP3YLR455W RGA2Q06407 1009 aa6.06□□□□□ -1.44
PDP3YLR455W SIT4P20604 311 aa6.05□□□□□ -1.44
PDP3YLR455W RTF1P53064 558 aa6.05□□□□□ -1.44
PDP3YLR455W NIS1P53939 407 aa6.05□□□□□ -1.44
PDP3YLR455W YNL115CP53925 644 aa6.04□□□□□ -1.44
PDP3YLR455W LAM6Q08001 693 aa6.04□□□□□ -1.44
PDP3YLR455W LEU3P08638 886 aa6.03□□□□□ -1.44
PDP3YLR455W FRK1Q03002 865 aaPredicted RBP6.03□□□□□ -1.44
PDP3YLR455W PAC1P39946 494 aaKnown RBP6.02□□□□□ -1.45
PDP3YLR455W BDP1P46678 594 aa6.02□□□□□ -1.45
PDP3YLR455W TUB4P53378 473 aa6.02□□□□□ -1.45
PDP3YLR455W AGE1Q04412 482 aa6.02□□□□□ -1.45
PDP3YLR455W RGA1P39083 1007 aa6.01□□□□□ -1.45
PDP3YLR455W ATF2P53296 535 aa6□□□□□ -1.45
PDP3YLR455W YNR021WP53723 404 aaKnown RBP6□□□□□ -1.45
PDP3YLR455W FPK1P53739 893 aa6□□□□□ -1.45
PDP3YLR455W YMR196WQ04336 1088 aa6□□□□□ -1.45
PDP3YLR455W AIR1P40507 360 aaKnown RBP5.99□□□□□ -1.45
PDP3YLR455W CLA4P48562 842 aa5.99□□□□□ -1.45
PDP3YLR455W GLC3P32775 704 aa5.98□□□□□ -1.45
PDP3YLR455W MOD5P07884 428 aa5.97□□□□□ -1.45
PDP3YLR455W SLY41P22215 453 aa5.97□□□□□ -1.45
PDP3YLR455W HST2P53686 357 aa5.94□□□□□ -1.46
PDP3YLR455W HED1Q03937 162 aa5.94□□□□□ -1.46
PDP3YLR455W CDC4P07834 779 aa5.93□□□□□ -1.46
PDP3YLR455W SCJ1P25303 377 aa5.93□□□□□ -1.46
PDP3YLR455W KXD1P53158 218 aa5.93□□□□□ -1.46
PDP3YLR455W GLN1P32288 370 aaKnown RBP5.91□□□□□ -1.46
PDP3YLR455W PUS6P53294 404 aa5.91□□□□□ -1.46
PDP3YLR455W PUS5Q06244 254 aa5.91□□□□□ -1.46
PDP3YLR455W MMP1Q12372 583 aa5.91□□□□□ -1.46
PDP3YLR455W BRE2P43132 505 aa5.9□□□□□ -1.46
PDP3YLR455W HXT10P43581 546 aa5.9□□□□□ -1.46
PDP3YLR455W TBF1Q02457 562 aa5.9□□□□□ -1.46
PDP3YLR455W AIM7Q12156 149 aa5.9□□□□□ -1.46
PDP3YLR455W PDC1P06169 563 aaKnown RBP5.89□□□□□ -1.47
PDP3YLR455W TPD3P31383 635 aa5.89□□□□□ -1.47
PDP3YLR455W LEO1P38439 464 aa5.89□□□□□ -1.47
PDP3YLR455W GCR2Q01722 534 aa5.89□□□□□ -1.47
PDP3YLR455W TRM1P15565 570 aaKnown RBP5.88□□□□□ -1.47
PDP3YLR455W ESS1P22696 170 aa5.88□□□□□ -1.47
PDP3YLR455W RRD1P40454 393 aaKnown RBP5.88□□□□□ -1.47
PDP3YLR455W YDL206WQ12424 762 aa5.88□□□□□ -1.47
PDP3YLR455W RPN1P38764 993 aaKnown RBP5.87□□□□□ -1.47
PDP3YLR455W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
PDP3YLR455W RPA14P50106 137 aa5.87□□□□□ -1.47
PDP3YLR455W ALR1Q08269 859 aa5.87□□□□□ -1.47
PDP3YLR455W TYW1Q08960 810 aaKnown RBP5.87□□□□□ -1.47
PDP3YLR455W YPR097WQ06839 1073 aa5.86□□□□□ -1.47
PDP3YLR455W MET32Q12041 191 aa5.86□□□□□ -1.47
PDP3YLR455W KTR1P27810 393 aaKnown RBP5.84□□□□□ -1.47
PDP3YLR455W YJU3P28321 313 aa5.84□□□□□ -1.47
PDP3YLR455W ASH1P34233 588 aa5.84□□□□□ -1.47
PDP3YLR455W SYH1Q02875 849 aaKnown RBP5.84□□□□□ -1.47
PDP3YLR455W CSN12P47130 423 aa5.83□□□□□ -1.48
PDP3YLR455W AFT1P22149 690 aa5.82□□□□□ -1.48
PDP3YLR455W HST3P53687 447 aa5.82□□□□□ -1.48
PDP3YLR455W PKH3Q03306 898 aaPredicted RBP5.82□□□□□ -1.48
PDP3YLR455W KIP2P28743 706 aa5.81□□□□□ -1.48
PDP3YLR455W RSC30P38781 883 aa5.8□□□□□ -1.48
PDP3YLR455W KIN1P13185 1064 aa5.79□□□□□ -1.48
PDP3YLR455W ARG8P18544 423 aa5.78□□□□□ -1.48
PDP3YLR455W IXR1P33417 597 aa5.78□□□□□ -1.48
PDP3YLR455W GAR1P28007 205 aaKnown RBP5.76□□□□□ -1.49
PDP3YLR455W MET22P32179 357 aa5.76□□□□□ -1.49
PDP3YLR455W YJR115WP47152 169 aa5.75□□□□□ -1.49
PDP3YLR455W SSA2P10592 639 aaKnown RBP5.74□□□□□ -1.49
PDP3YLR455W VAC17P25591 423 aa5.74□□□□□ -1.49
PDP3YLR455W MSB3P48566 633 aaPredicted RBP5.74□□□□□ -1.49
PDP3YLR455W ENV9Q08651 330 aa5.74□□□□□ -1.49
PDP3YLR455W RAD59Q12223 238 aa5.74□□□□□ -1.49
PDP3YLR455W UGA3P26370 528 aa5.73□□□□□ -1.49
PDP3YLR455W MRT4P33201 236 aaKnown RBP5.73□□□□□ -1.49
PDP3YLR455W YPL062WQ02781 134 aa5.73□□□□□ -1.49
PDP3YLR455W GBP2P25555 427 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms