RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W TY1A-GR3P0CX67 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-LR1P0CX68 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-MR2P0CX69 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-JR2P47099 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-DR1Q03856 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-ML1Q04706 440 aaKnown RBP7.06□□□□□ -1.28
YLR400WYLR400W TY1A-BRQ12217 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-NL2Q12470 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-GR2Q12485 440 aa7.06□□□□□ -1.28
YLR400WYLR400W YEL077CQ3E7X8 1277 aa7.04□□□□□ -1.28
YLR400WYLR400W SPB4P25808 606 aaPredicted RBP7.03□□□□□ -1.28
YLR400WYLR400W NUP42P49686 430 aaKnown RBP7.03□□□□□ -1.28
YLR400WYLR400W IES2P40154 320 aa7.02□□□□□ -1.29
YLR400WYLR400W ERF2Q06551 359 aa7.01□□□□□ -1.29
YLR400WYLR400W ERG12P07277 443 aa7□□□□□ -1.29
YLR400WYLR400W KEX2P13134 814 aa6.99□□□□□ -1.29
YLR400WYLR400W SPT16P32558 1035 aaKnown RBP6.99□□□□□ -1.29
YLR400WYLR400W DIT2P21595 489 aa6.98□□□□□ -1.29
YLR400WYLR400W CLB5P30283 435 aa6.97□□□□□ -1.29
YLR400WYLR400W CST6P40535 587 aa6.96□□□□□ -1.3
YLR400WYLR400W RRN7P40992 514 aa6.96□□□□□ -1.3
YLR400WYLR400W TRK1P12685 1235 aa6.95□□□□□ -1.3
YLR400WYLR400W PAT1P25644 796 aaKnown RBP6.93□□□□□ -1.3
YLR400WYLR400W TEA1P47988 759 aa6.93□□□□□ -1.3
YLR400WYLR400W LAM6Q08001 693 aa6.93□□□□□ -1.3
YLR400WYLR400W SIT4P20604 311 aa6.92□□□□□ -1.3
YLR400WYLR400W YNL115CP53925 644 aa6.91□□□□□ -1.3
YLR400WYLR400W CLA4P48562 842 aa6.9□□□□□ -1.3
YLR400WYLR400W BDP1P46678 594 aa6.89□□□□□ -1.31
YLR400WYLR400W RTF1P53064 558 aa6.89□□□□□ -1.31
YLR400WYLR400W NIS1P53939 407 aa6.89□□□□□ -1.31
YLR400WYLR400W AGE1Q04412 482 aa6.89□□□□□ -1.31
YLR400WYLR400W PAC1P39946 494 aaKnown RBP6.88□□□□□ -1.31
YLR400WYLR400W FRK1Q03002 865 aaPredicted RBP6.88□□□□□ -1.31
YLR400WYLR400W AIR1P40507 360 aaKnown RBP6.87□□□□□ -1.31
YLR400WYLR400W TUB4P53378 473 aa6.87□□□□□ -1.31
YLR400WYLR400W MOD5P07884 428 aa6.86□□□□□ -1.31
YLR400WYLR400W RQC2Q12532 1038 aaKnown RBP6.84□□□□□ -1.31
YLR400WYLR400W FPK1P53739 893 aa6.83□□□□□ -1.32
YLR400WYLR400W HED1Q03937 162 aa6.81□□□□□ -1.32
YLR400WYLR400W CDC4P07834 779 aa6.8□□□□□ -1.32
YLR400WYLR400W SLY41P22215 453 aa6.79□□□□□ -1.32
YLR400WYLR400W ATF2P53296 535 aa6.78□□□□□ -1.32
YLR400WYLR400W YNR021WP53723 404 aaKnown RBP6.78□□□□□ -1.32
YLR400WYLR400W YMR196WQ04336 1088 aa6.78□□□□□ -1.32
YLR400WYLR400W SCJ1P25303 377 aa6.77□□□□□ -1.33
YLR400WYLR400W PUS5Q06244 254 aa6.77□□□□□ -1.33
YLR400WYLR400W HST2P53686 357 aa6.76□□□□□ -1.33
YLR400WYLR400W TPD3P31383 635 aa6.75□□□□□ -1.33
YLR400WYLR400W BRE2P43132 505 aa6.75□□□□□ -1.33
YLR400WYLR400W KXD1P53158 218 aa6.75□□□□□ -1.33
YLR400WYLR400W PUS6P53294 404 aa6.75□□□□□ -1.33
YLR400WYLR400W GCR2Q01722 534 aa6.75□□□□□ -1.33
YLR400WYLR400W GLC3P32775 704 aa6.74□□□□□ -1.33
YLR400WYLR400W HXT10P43581 546 aa6.74□□□□□ -1.33
YLR400WYLR400W PDC1P06169 563 aaKnown RBP6.73□□□□□ -1.33
YLR400WYLR400W MET32Q12041 191 aa6.73□□□□□ -1.33
YLR400WYLR400W MMP1Q12372 583 aa6.73□□□□□ -1.33
YLR400WYLR400W GLN1P32288 370 aaKnown RBP6.7□□□□□ -1.34
YLR400WYLR400W ASH1P34233 588 aa6.7□□□□□ -1.34
YLR400WYLR400W RGA1P39083 1007 aa6.7□□□□□ -1.34
YLR400WYLR400W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
YLR400WYLR400W RPA14P50106 137 aa6.7□□□□□ -1.34
YLR400WYLR400W YPR097WQ06839 1073 aa6.69□□□□□ -1.34
YLR400WYLR400W TRM1P15565 570 aaKnown RBP6.68□□□□□ -1.34
YLR400WYLR400W ESS1P22696 170 aa6.68□□□□□ -1.34
YLR400WYLR400W RRD1P40454 393 aaKnown RBP6.68□□□□□ -1.34
YLR400WYLR400W TYW1Q08960 810 aaKnown RBP6.68□□□□□ -1.34
YLR400WYLR400W YDL206WQ12424 762 aa6.68□□□□□ -1.34
YLR400WYLR400W AFT1P22149 690 aa6.67□□□□□ -1.34
YLR400WYLR400W ALR1Q08269 859 aa6.67□□□□□ -1.34
YLR400WYLR400W AIM7Q12156 149 aa6.67□□□□□ -1.34
YLR400WYLR400W TBF1Q02457 562 aa6.66□□□□□ -1.34
YLR400WYLR400W KTR1P27810 393 aaKnown RBP6.65□□□□□ -1.34
YLR400WYLR400W YJU3P28321 313 aa6.65□□□□□ -1.34
YLR400WYLR400W SYH1Q02875 849 aaKnown RBP6.65□□□□□ -1.34
YLR400WYLR400W MET22P32179 357 aa6.64□□□□□ -1.35
YLR400WYLR400W RSC30P38781 883 aa6.64□□□□□ -1.35
YLR400WYLR400W HST3P53687 447 aa6.64□□□□□ -1.35
YLR400WYLR400W GAR1P28007 205 aaKnown RBP6.62□□□□□ -1.35
YLR400WYLR400W CSN12P47130 423 aa6.6□□□□□ -1.35
YLR400WYLR400W YJR115WP47152 169 aa6.6□□□□□ -1.35
YLR400WYLR400W ENV9Q08651 330 aa6.6□□□□□ -1.35
YLR400WYLR400W KIP2P28743 706 aa6.59□□□□□ -1.35
YLR400WYLR400W YPL062WQ02781 134 aa6.59□□□□□ -1.35
YLR400WYLR400W IXR1P33417 597 aa6.58□□□□□ -1.36
YLR400WYLR400W PKH3Q03306 898 aaPredicted RBP6.58□□□□□ -1.36
YLR400WYLR400W MSB3P48566 633 aaPredicted RBP6.57□□□□□ -1.36
YLR400WYLR400W RGA2Q06407 1009 aa6.57□□□□□ -1.36
YLR400WYLR400W MRT4P33201 236 aaKnown RBP6.56□□□□□ -1.36
YLR400WYLR400W YDR444WQ04093 687 aa6.56□□□□□ -1.36
YLR400WYLR400W GBP2P25555 427 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
YLR400WYLR400W VAC17P25591 423 aa6.55□□□□□ -1.36
YLR400WYLR400W LEU3P08638 886 aa6.54□□□□□ -1.36
YLR400WYLR400W ARG8P18544 423 aa6.54□□□□□ -1.36
YLR400WYLR400W LCB5Q06147 687 aaKnown RBP6.54□□□□□ -1.36
YLR400WYLR400W KIN1P13185 1064 aa6.53□□□□□ -1.36
YLR400WYLR400W UGA3P26370 528 aa6.53□□□□□ -1.36
YLR400WYLR400W RAD59Q12223 238 aa6.51□□□□□ -1.37
YLR400WYLR400W PTK2P47116 818 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 80.4 ms